Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0625 ATGGGATGTTCTCAATCAAGGTTGGAAGATGAAGAGGCAGTTCAAATTTGCAAAGATAGAAAAAATTACATCAAACAAGCTGTTGAACAAAGAACTCGCTTCGCCACCGGACACATAGCCTACATCCAATCCCTTAAAAGAGTCTCGGCCGCTCTTCGAGAATACATCGAGGGAGACGAGCCTCGTGAGTTCTCGTTGGACACAGTCATTGCCCCTCCTTTTGCAGCTGGGAAGAAGACTGGCCCTGGCTTCATTCCTATTTCATCAAAATCGTTCACTCCGGCAGCAATTGAGTTTGGAGTTGGACCAAATTCTACACTGAAAGTGAATTACTTAAGGCCTGGTGGTAATCCGGCGGTTTTGGTTGAGGAAAGGCCTCGATCTCCGGAAATGGTCCGGGTTGAAACATATTCTCCAATGCACCATCATTATGGCAATGATGGATTTTTTGGCATGCAATATTCACCTGTGAATCCTTCAATTTTTCCTTATTCTCCAAGTAATAGGCCTAATATCCCTCCCCCTTCCCCTCAGAATTCGCAATGGGATTTCTTTTGGAACCCTTTTTCGTCGTTAGACAACTACGGTTACCCTTCAAGAAGTAGCCTTGATCAGACTATTATGGATGATGACTACAGAGGGCTTAGGCAGGTCCGAGAAGAAGAGGGAATACCGGACCTAGAAGAAGACGAAACTGAACAAGAAGATTATGTTGGGAAGAGAAATGTGGCTGAAGAAAGAACCAGAAACGTTGGAAACATTGGAAAAAATGGAAACACTTCCAAAGAAGAAGTATTAGTTGAAGATGTTGACGAGGATGAGGATGAGGAAGAGGAGGAGGAAGAGGAAGACGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGATGGAACAGATAATGAAACTGAAACTGAAGCTGATCATGATGTCAAAGAATCACAAGCAAATGGAAGTGCAACTCTGGAAGTATCGAAATCACAGGCTGCAGGCCATATTGGATCCAGTCGTCGCGAAATGGCTATAGGTAAGCAAGAAGCTAAGGAAGACTCGCCGGGTTTTACTGTTTATGTAAACAGAAGGCCAACCAGCATGGCAGAAGTGATCAATGATCTTGAAGCTCAGTTCACAATCGTCTGCAATGCGGCAAATGATGTCTCAGTGTTGTTAGAGGCCAAGAGATCTCAGTATTTACCAACATCTAATGAATTGTCTGCGTCCAAGTTGTTGAACCCAAAAGCTCTGTTCCGAACAGCATCCTCGCGCTCCTCCTCGTCAAGATTCTTAACAAATTGTCCGAGCATTAGAGAAGAAGTTTATGAGGGCACTAAAGATCTCATGGATGGGCACTGTATGATTTCCGGTAGTCACCATTCGACGTTGGACAGGTTAAACGCTTGGGAGAAAAAGCTTTATGATGAAGTCAAGGCCGGAGAACGGGTTCGAATGGCATATGAGAAGAAATGGAAGCAACTTAGGAACCAAGATGTAAAGGGAGAGGAACCCTCTTCTACAGATAAAACAAGAGCAGCCATCAGAGATTTAGATACGCAGACAACGGTTTCAATACACACAGTTGAAGCTATTTCCAGGAGAATAGAAAAACTAAGGGATGAAGAGCTTCATCCCCAACTTCTTGAATTGGTACAAGGGCTAGCAAAGATGTGGAAAGTGATGGCAGAATGTCATCAGAAGCAGAAGAGAACCTTAGATGAAGCTAAGATGCTTCTAGCTTCTAAGTTACATGCCAGGAAACACTCCTCCATGTCGATGACTGATCCAACAAGGCTAGCCCGTTCGGCTTCAAATCTTGAATTCGAGATAAGAAACTGGCGAAACACCTTCGAGTCATGGATTACTTCGCAAAGATCCTATGTCCATGCGCTAGCTGGATGGCTTCTCCGGTGTGTGAGGTCCGAGCCTGACGTGTCAAAGTTACCATGCTCTCCTCAGACTTCTAGTGGTACTCACCCGTTATTCGGACTCTGTGTTCAGTGGTCAAGGCGACTAGACGCCATACACGAAACAGCAGTGCTTGATGGCATGGACTTCTTCGCAGCCGGCATGGGGTCGATCTACTCGCAGCAGTTAAGAGAAGATTCTAGGCAGCACTCGTTTGCTTCGAGACGAGAAAATGGAAACATGGAAATTGTGGAAGTTGGAAGAGTAGAAGAGGTAATGACTACAGAAAAATTAGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTAGCAGAGTTTGCCTTTGATTCTTCTGAGGGATACAATGAAGTTGTGAAGCAATGGGAGAATGGCAAGTGTCTGGATTCTTCTTCCACTGAGATTAGATCATAG 2349 0.447 MGCSQSRLEDEEAVQICKDRKNYIKQAVEQRTRFATGHIAYIQSLKRVSAALREYIEGDEPREFSLDTVIAPPFAAGKKTGPGFIPISSKSFTPAAIEFGVGPNSTLKVNYLRPGGNPAVLVEERPRSPEMVRVETYSPMHHHYGNDGFFGMQYSPVNPSIFPYSPSNRPNIPPPSPQNSQWDFFWNPFSSLDNYGYPSRSSLDQTIMDDDYRGLRQVREEEGIPDLEEDETEQEDYVGKRNVAEERTRNVGNIGKNGNTSKEEVLVEDVDEDEDEEEEEEEEDEEEEEEEEEEDGTDNETETEADHDVKESQANGSATLEVSKSQAAGHIGSSRREMAIGKQEAKEDSPGFTVYVNRRPTSMAEVINDLEAQFTIVCNAANDVSVLLEAKRSQYLPTSNELSASKLLNPKALFRTASSRSSSSRFLTNCPSIREEVYEGTKDLMDGHCMISGSHHSTLDRLNAWEKKLYDEVKAGERVRMAYEKKWKQLRNQDVKGEEPSSTDKTRAAIRDLDTQTTVSIHTVEAISRRIEKLRDEELHPQLLELVQGLAKMWKVMAECHQKQKRTLDEAKMLLASKLHARKHSSMSMTDPTRLARSASNLEFEIRNWRNTFESWITSQRSYVHALAGWLLRCVRSEPDVSKLPCSPQTSSGTHPLFGLCVQWSRRLDAIHETAVLDGMDFFAAGMGSIYSQQLREDSRQHSFASRRENGNMEIVEVGRVEEVMTTEKLAEVAIKVLCAGMSVAISSLAEFAFDSSEGYNEVVKQWENGKCLDSSSTEIRS* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0625 782 MobiDBLite consensus disorder prediction 312 330 - -
Amo04g0625 782 MobiDBLite consensus disorder prediction 266 302 - -
Amo04g0625 782 PANTHER UNCHARACTERIZED 1 781 - -
Amo04g0625 782 PANTHER DUF630 FAMILY PROTEIN 1 781 - -
Amo04g0625 782 Coils Coil 263 299 - -
Amo04g0625 782 MobiDBLite consensus disorder prediction 220 348 - -
Amo04g0625 782 Pfam Protein of unknown function (DUF632) 363 687 IPR006867 -
Amo04g0625 782 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0625 Amo-Chr4 17862534 17866860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0625 1 230 Acyl Lipid Metabolism Gene Families AT2G27090 25.820 2.19e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0625 - - gmx:100780704 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1747 14 35842827 35847326 Amo04g0625 04 17862534 17866860 hybridization