Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0592 ATGCTTTGTGCAACTCATCATACATTATTATTATTCTCTAACCCGTGTTGTTTCCTTAAGAATCGAGTTTCAAATGGCAGAGGATTTTCTTCAAATGAGAGTTGTTTTGTTAGAGGTCACCAAATGGACATCAAACAATATTTTGGACTTATATCATCCCGTTCTCCACGGAACAAAGCAGGAAGAGTTGTATCCCCAAGCTGTGTGCTGCCATTGACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTTAGACCTGGCTTGATGGCTGATGGAGGGAATGTGGCTTTGCACGAGATAGATGGCCTTGTCGTCGTCCTCAAGCTTCAAGGAGCATGTGGCTCGTGTCCTAGCTCGGCCATGACATTAAAGATGGGAATTGAGACTCGCCTTCGTGATAAGATCCCAGAAATCATGGAAGTGGAGCAGATTGTGGACGCCGAGACTGGCCTCGAGTTAACAGAGCAAAATGTCGAGAGTGTTCTTTCTGAAATTAGGCCATACCTTGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTAAGATCGATGATTACGTTGTCAAAGTTCGGCTAAGTGGACCGGCGGCCGGAGTTATGACGGTTCGCGTGGCACTAACGCAAAAGTTGAGAGACAAGATACCTTCTATTGGAGCTGTGCAGCTAATAGACTGA 672 0.4554 MLCATHHTLLLFSNPCCFLKNRVSNGRGFSSNESCFVRGHQMDIKQYFGLISSRSPRNKAGRVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEIMEVEQIVDAETGLELTEQNVESVLSEIRPYLVGTGGGILELVKIDDYVVKVRLSGPAAGVMTVRVALTQKLRDKIPSIGAVQLID* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0592 223 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 152 222 IPR034904 -
Amo04g0592 223 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 12 223 - -
Amo04g0592 223 Pfam NifU-like domain 77 142 IPR001075 GO:0005506|GO:0016226|GO:0051536
Amo04g0592 223 Pfam NifU-like domain 158 219 IPR001075 GO:0005506|GO:0016226|GO:0051536
Amo04g0592 223 Gene3D - 152 223 IPR034904 -
Amo04g0592 223 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 12 223 - -
Amo04g0592 223 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 74 148 IPR034904 -
Amo04g0592 223 Gene3D - 69 151 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0592 Amo-Chr4 15612751 15614870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0592 - - gmx:100806364 351.288