Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0532 ATGGAAAATCAATCAATAAACGCTGCAGCTCCAACAATGGAAACAAAGAAATTTCCTGAATCTCGTGAGAGAGAAATGGCTGAAGTAGACTCAGCTTGTGTTGACACAATTCTTCATCAGGCTATCTCTGCTCAATTTAGGTATCCAAACCTAGTGTACTTAGGAAAAGATAGAGATAGATACCTCACCCATTGTGTTCCACTTCACAAAGCAGCACTGAAAGGTGACTGGAAAGAAGCAAAGAAGATCCTAGAACATGATGAATTGCTACTGACTGCTGCCATAACAAAAGGGTGGGCAACACCCCTCCATGTTGCAGTGGGAGCAAACCACGTCCACATTGCGAAGGAGCTGGTGCAACTAATGCAACCTGGTGATCTTGAATTGCAGGACAATAAAGGCAACACTGCCTTTTGCTTTGCTGCAGCAGTTGGGAATGTGCAGATTGCTGAGATAATGAGGAGAAAAAACGATTTGTTGCCACAAATTAGGGTTAGAAGTGGAATGACTCCTCTTCACCTTGCTGCTATGCAAGGAAGGAGTGAGATGGCATGGTACCTATTCCCTCAAACGAAAGGAATCCTGCAAGAAGAGGATTGGATTTCCCTGTTCTTCATTTGTATAAATTCGGGACTCTTTGATTTAGCCCTTGAAATGTTGAATCAGAAGGACAAGCCAATTTCGGAGGTCAAACTAGCTACTGCAAGGGGAGATGACTGTGAGACAGGTTTACATGTCCTGGCTCGGAAGCTTCCAATCTGCAGTTGCCAAAGTCAACAATATGGAAAAGGCTTCATGCATTTCTGTAAAAAGGACACCTCCATTCTCAAACTCACAAAACGGATGTGGCAAATATTTCTCACCCTTGAAGATGAAATCTTCATAGAAACCATAACAGAACCTTCTCAAGCAATATTTATTGCTGCAGAAGTGGGAAACTTTGAGTTTCTATCTGTGCTCTTGAGCACTTACCCTGATTTGATATGGGAATTGGACACAACGGGTCGAAGTATAATTCACACAGCTGTTTTGCATCGTCATGCAAGCATCTTCAATCTTATACATGAAGTTGGCTCAATCAAAGATATCATAGTCACTTTCCTTGATGACAAAGGGAACAATTTGTTGCATTGTGCTGCAAAATTAGCACCACCAGATAGACTTAACATTGTTTCTGGAGCTGCTTTACAAATGATGCTTGAATTGTCATGGTTTGAGGAGGTGAAAAAGATAACGCCGCCAATGTACCTTGAAATGAGAAATAATGCAGGCTTTAGTCCCCGAAAGCTGTTCACCATGGAGCACGAAGAATTGCTGAAACAGGGAGAGTCATGGATGAAGAGAACAGCAGAATCTTGCATGGTTGTCTCAACTCTCATTGCCACCGGAGTCTTTTCTGCTGCCTTCACCTTGCCAGGTGGCAACATTGACAATATAGGAAGTCCAAAGTATCTGAAGAAACCATCTTTCTTGGTATTTGCAATATCGGATGCCACCGCATTGATCTCATCCTCAGCCTCAATACTTATATTCTTGTCCATCCTCATCTCGCGGTATGCTGAATATGACTTTCTCTGCTCACTGCCCATGAAGCTCATATCCGGATTAGTGACACTGTTCATCTCTATCATAAGCATGATAATAACATTCAGCAGTGCTTACTTTGTGACATGTTTCCAGGGTTTGAAGTGGATACCTATCTTCATTTCTGTACTAACATTTGTACCAATACCCTTATTTGTATGTCTTCAGTTTCCTCTGTGGTCTGACATTGTGTATTCTACCTACATTTGTAGTTCTCTTTTTAGGCTACGCAAACCCAAGATTACCTAG 1833 0.4195 MENQSINAAAPTMETKKFPESREREMAEVDSACVDTILHQAISAQFRYPNLVYLGKDRDRYLTHCVPLHKAALKGDWKEAKKILEHDELLLTAAITKGWATPLHVAVGANHVHIAKELVQLMQPGDLELQDNKGNTAFCFAAAVGNVQIAEIMRRKNDLLPQIRVRSGMTPLHLAAMQGRSEMAWYLFPQTKGILQEEDWISLFFICINSGLFDLALEMLNQKDKPISEVKLATARGDDCETGLHVLARKLPICSCQSQQYGKGFMHFCKKDTSILKLTKRMWQIFLTLEDEIFIETITEPSQAIFIAAEVGNFEFLSVLLSTYPDLIWELDTTGRSIIHTAVLHRHASIFNLIHEVGSIKDIIVTFLDDKGNNLLHCAAKLAPPDRLNIVSGAALQMMLELSWFEEVKKITPPMYLEMRNNAGFSPRKLFTMEHEELLKQGESWMKRTAESCMVVSTLIATGVFSAAFTLPGGNIDNIGSPKYLKKPSFLVFAISDATALISSSASILIFLSILISRYAEYDFLCSLPMKLISGLVTLFISIISMIITFSSAYFVTCFQGLKWIPIFISVLTFVPIPLFVCLQFPLWSDIVYSTYICSSLFRLRKPKIT* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0532 610 SUPERFAMILY Ankyrin repeat 304 382 IPR036770 -
Amo04g0532 610 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 30 608 - -
Amo04g0532 610 SMART ANK_2a 167 196 IPR002110 GO:0005515
Amo04g0532 610 SMART ANK_2a 334 363 IPR002110 GO:0005515
Amo04g0532 610 SMART ANK_2a 63 93 IPR002110 GO:0005515
Amo04g0532 610 SMART ANK_2a 133 162 IPR002110 GO:0005515
Amo04g0532 610 SMART ANK_2a 98 129 IPR002110 GO:0005515
Amo04g0532 610 PANTHER CASKIN 30 608 - -
Amo04g0532 610 Pfam Domain of unknown function 444 556 IPR026961 -
Amo04g0532 610 ProSiteProfiles Ankyrin repeat profile. 167 188 IPR002110 GO:0005515
Amo04g0532 610 ProSiteProfiles Ankyrin repeat region circular profile. 167 188 - -
Amo04g0532 610 Gene3D - 58 256 IPR036770 -
Amo04g0532 610 Gene3D - 270 441 IPR036770 -
Amo04g0532 610 SUPERFAMILY Ankyrin repeat 67 221 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0532 Amo-Chr4 13535776 13544607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0532 68 556 Miscellaneous Gene Families AT3G09550 21.561 1.60e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0532 - - vun:114192271 745.347