Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0488 ATGGCTGCTAGTGCTACCAATGATCATAATCAATGGAAGCAATTCTATAATCAGCACCAAACTCATCAAATGACGGCGGCGGCGGCGGCAACAACCACCATGGTGGCAGCATCATCATCATCAGATAGTATTTTGAGTCCAAAAGGAAGTGGTGTTACAAAACCAATTAGAAGAAGATCAAGAGCATCAAAGAAAACACCAACAACACTTCTCAATGCAAACACCACCAATTTTAGGGCATTGGTGCAACAATTCACAGGGTGTCCTAATAGCAACAACAGCATTATGTCATGTTCATCACTAATTGGGGTCCATAACAAAGGTCCTATTACCTTAAATTTCCAACAAGGTTCATCATCATCAGCAGCAAGAAGAACAATAATTCCATCATCATTTGTTGTTGGTGGGGGAAGTGGAAGAGATTATTGTTATGATGATCATAACCAGGGTCAACAACAATTAGCTGCTACTACTACTACTAATAATAATTCTCTTTTTCCATGGCAGAAGCAACAGGATCATCAATTGCAAGAGCAAGAGAGTGGTTACTCTTTTGATGAGTATGTTATGAAGAACAGTTATAATAGTGATGATCATGGCATGATGATGATCATGGATAATGATTTTAGTTTGCATGATCTTGCTGTCAATAATAATGCCTTCCCTGATCATGATACTTACTAA 684 0.3845 MAASATNDHNQWKQFYNQHQTHQMTAAAAATTTMVAASSSSDSILSPKGSGVTKPIRRRSRASKKTPTTLLNANTTNFRALVQQFTGCPNSNNSIMSCSSLIGVHNKGPITLNFQQGSSSSAARRTIIPSSFVVGGGSGRDYCYDDHNQGQQQLAATTTTNNNSLFPWQKQQDHQLQEQESGYSFDEYVMKNSYNSDDHGMMMIMDNDFSLHDLAVNNNAFPDHDTY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0488 227 PANTHER VQ MOTIF PROTEIN 15 221 - -
Amo04g0488 227 PANTHER VQ MOTIF-CONTAINING PROTEIN 15 221 IPR039609 -
Amo04g0488 227 MobiDBLite consensus disorder prediction 39 69 - -
Amo04g0488 227 Pfam VQ motif 67 89 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0488 Amo-Chr4 9893726 9894808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0488 - - aip:107637671 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1616 14 29359890 29360825 Amo04g0488 04 9893726 9894808 hybridization