Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0434 ATGCCACCGCCGCCACCAGCACCAGATCTTCCTGGGTTTTACTATGACCCTGAGAAGAATAGGTATTTCCCCATCAAAGGTCCCATACCAGGCTCTTCTCGTTCTTCCTTTTCTTCTTCCTCTTCATCTTCAAAGCATGCTACTCACAAAGCATCCCAAACATCTTCAACTCAGGAGTTGTTGCAGGAACTTAGAAGCAGAACCTCCAAGTTGATTCAGGCTAGGGAGATAGATGGTCATCGTGTCATTGCTTCCCACAATTACAAGTGTAACTTCACTGAGGAGTTTAGGAAAATACAAGCATCACAGCCTTCGGTATGGAAGTATAAGGGAACAGATAAGATTGGTATTAGTGCTTTGAAACAGTGCATGTCCGTGTGCAGACATTTGAGGGTGAATGTGATATTTTGTACTTGCAGTCTTTGTGAAGTTGGAAGGGATGGGGGATATTTTGATGGTGAGGTTAAGTGGACGCCCGATTGTAATAATGTGGTGCCTGGTCCAGTTTCAAGACCTACTGGAGGGTCCGTGGTTATGTCATCTGGTATATCTTGCATAAGATCAGGCCCGGAGTGTTCTTCTCATGCTGCAAATGGCGGTCCTATTGTTGGACATGCATTGTTTACAACTTTGGGTTCAGAGACATCCGGTGGGTCAATTTATTCTCTTGGCCTTGTGGAATCATTAGATCTTGGGTCAGGTATACTGAACACATGGAGCAGACTGGATGAAGTTGCTTCTTTCAAGTGTACCATTTGGACAGCAGAATATGATTATAGTAGACATCGGGCTATAATTGGTACCAACATGGGAGCTGCATTGGTGGATTTGGCAACTGGGAGGAGATCATGGTTTTTACGATGTAAAAGTGATATCTTTGCACAGCAGATTGTTAATTCACTCAGTGGAGATATAGACCCTTCTCTTACCATTAGAATGCCTTCATCTATATCCAGGTTAGTCAGTCTTTATCCCCTGCCAATTGCTATTCGACTTTATGATGATCAGTACTTCTTGGCAAGCTCCATGGACGGAACGATGAGGCTCTATGATCTTCGCCTGCTTCAGAGAGGTTCTGTTCAATCTTATGAAGGGCATGTGAATTCCCATTCGCGTATACAACTCGGTTTTGACCCAGATGAGAGATTTGTTATTATCAAAACTGGCAAACTTCTTTTTGAGGAAAAATTCTGTGATTCAGTTCTCTCCAGTGTTTGCTATCAATCATGTAAAGGTAGTGACCCCAATATGATTTTGGCCTTTCTCCATTCAATTTAA 1278 0.4296 MPPPPPAPDLPGFYYDPEKNRYFPIKGPIPGSSRSSFSSSSSSSKHATHKASQTSSTQELLQELRSRTSKLIQAREIDGHRVIASHNYKCNFTEEFRKIQASQPSVWKYKGTDKIGISALKQCMSVCRHLRVNVIFCTCSLCEVGRDGGYFDGEVKWTPDCNNVVPGPVSRPTGGSVVMSSGISCIRSGPECSSHAANGGPIVGHALFTTLGSETSGGSIYSLGLVESLDLGSGILNTWSRLDEVASFKCTIWTAEYDYSRHRAIIGTNMGAALVDLATGRRSWFLRCKSDIFAQQIVNSLSGDIDPSLTIRMPSSISRLVSLYPLPIAIRLYDDQYFLASSMDGTMRLYDLRLLQRGSVQSYEGHVNSHSRIQLGFDPDERFVIIKTGKLLFEEKFCDSVLSSVCYQSCKGSDPNMILAFLHSI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0434 425 PANTHER KATANIN P80 SUBUNIT 301 407 - -
Amo04g0434 425 PANTHER KATANIN P80 SUBUNIT 15 300 - -
Amo04g0434 425 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 301 407 - -
Amo04g0434 425 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 15 300 - -
Amo04g0434 425 MobiDBLite consensus disorder prediction 31 60 - -
Amo04g0434 425 MobiDBLite consensus disorder prediction 24 60 - -
Amo04g0434 425 Gene3D - 319 413 IPR015943 GO:0005515
Amo04g0434 425 SUPERFAMILY WD40 repeat-like 237 406 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0434 Amo-Chr4 8502187 8506848 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0434 K11799 - gmx:100798753 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1575 14 28214872 28221196 Amo04g0434 04 8502187 8506848 hybridization