Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0405 ATGGCCACTCCGCCACTCAAGAACAACAATGACATTATTGAAGATGAATCCTCCATGGATGATGATCAAGAAGAAATAACAACACAGCTAGATCTACCTTCATCAACAATGGACGACAATAACATCACAATGCAGGAGGAGATCATGCAAATTGGGAGGAGAAACAACAAGAGGTACATACCTCTTTTAGTGATCAATTATGTTTGCTTATTTACTGGTTCAGTCGCATCAAGCTTGCTTTCAAAATACTATTTCAACCACAAAGGTTCAAGCAGATGGGTCTCAACATGGGTACAATCTTCTGGGTTCCCACTTCTTTTGATCCCAATCACCCTCCCTTATTTTCTAAACCTCACAAAAAGAAAACCCTTTACCGATTTCACCACAAAGATGGTAGCTTTATCAATCTCAATAGGGTTCATGCTTGGAATCAACAACCTCCTATTCTCATGGGGTAACTCCTTCTTACCCGTTTCAACCTCTTCACTGTTGCTTTCTTCCCAACTTGTCTTCAATCTTGTACTCTCAATCATCATTGTGAAGCAGAAACTCACATTCTCCAACCTTAATTGTGTTGTGCTATTGACGTTGAGCTCTATCCTATTGGGCTTGGACTCTAGTCACGAGAAGAATGGAACAAAAATGGAAAGAGACAAGTACTTCATTGGATTCTTCTGCACAATCGGTGCAGGTTTGTTGTTTGCACTTTACCTGCCTGTAATGGAGCTTGTTTACAGAAGGGTCTATTGTTACCAGATGGTTATGGAGATGCAGCTCATCATGGAGCTTGCCGCCACTCTTCTTGCATCAATAGGAATGTCCATTGACGGTGGTTTCTCACACATGAAGGTGGAAAGCGAGAGGGTGTTTGAGAAAGGAGGAAGAATATACTGGGTGACGGTTACCGGGAACATGGTGACATGGCAAATGTGCTTCATGGGAACAGCGGGGATGATATACATGACGTCCTCGCTCACGGGAGGGATATGCACGACGGCGTTGGTGTCCATGAACGTTGTCGGTGGAGTGCTTGTCTTCAAAGATTCCTTTAATGCTGTCAAGGCTGTCTCCACTGCCATTTGCATCTGGGGCTTCTGCTCCTATCTTTACGGCCTCTATACCAACAACAGCCACCACCATCACCGCTCATCTTCTTCTTCCATAGACAAGGACAAAGAGAACGAGATGATTCCTATCGTCAACCCTTCTCTCGCTCATTGA 1221 0.439 MATPPLKNNNDIIEDESSMDDDQEEITTQLDLPSSTMDDNNITMQEEIMQIGRRNNKRYIPLLVINYVCLFTGSVASSLLSKYYFNHKGSSRWVSTWVQSSGFPLLLIPITLPYFLNLTKRKPFTDFTTKMVALSISIGFMLGINNLLFSWGNSFLPVSTSSLLLSSQLVFNLVLSIIIVKQKLTFSNLNCVVLLTLSSILLGLDSSHEKNGTKMERDKYFIGFFCTIGAGLLFALYLPVMELVYRRVYCYQMVMEMQLIMELAATLLASIGMSIDGGFSHMKVESERVFEKGGRIYWVTVTGNMVTWQMCFMGTAGMIYMTSSLTGGICTTALVSMNVVGGVLVFKDSFNAVKAVSTAICIWGFCSYLYGLYTNNSHHHHRSSSSSIDKDKENEMIPIVNPSLAH* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0405 406 Pfam Purine nucleobase transmembrane transport 62 377 - -
Amo04g0405 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 120 209 - -
Amo04g0405 406 PANTHER PURINE PERMEASE 4-RELATED 49 385 - -
Amo04g0405 406 MobiDBLite consensus disorder prediction 1 23 - -
Amo04g0405 406 PANTHER OS09G0467300 PROTEIN-RELATED 49 385 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0405 Amo-Chr4 7879817 7882421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0405 37 371 Organic Solute Cotransporters AT1G30840 60.882 6.87e-132 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0405 - - gmx:100803560 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1535 14 27490472 27492933 Amo04g0405 04 7879817 7882421 hybridization