Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0350 ATGGAGGAAGCCATATCCCGCTTGGTCGCCGAGCTCGACGACCTCCGCCACCACTCTACCACCAGTTCCGCCGCCGCCAACCCAACCCCTCTCTCCCGCCAATCCCTCTCCGACCTCAACTTCCTCCTCTCCGACGCCAACGACACCGTCCCCATCGACGCCCTCTACGATGAGCTATCCGCCAAGTCCCTCTCCCCTTCCTCCCTCGTCCCCCCTCTCTCCGCCGCCATGGACTCCTCCCCAAACCCAAACCACTCCCTCCTGGCCTCCAACGCCTTCCTCTCCCTCCTCCTCTCTCCTAACGCCCCCGTCTTCACCCTCTTCACCCCTCTCTCCTTCCTCTCCCTCCTCCGCTCCCTCCGCCGCTCCCTCAAAGCCTCCCCAGCCTTCACCCAGCCCAATTCTTCCAAAAATCGCAAGCGCCGCCGTGCCGGTAAGGCTTCCAGGAAAAACCCGTCCCAAGACGATGCTGGCATGGATGAAGAGGAAGAGAATCAAGAAAATGGAGGAAGCAGTTCAGTGGATGTTAAGGCTTTGCTCGTCGTGCTGGAGAAGCTGGCTTCGGTTATGGATCTGATTCACTTGGATCGGTTCCCGGAGAGTCTTAGGTCTCTGGTTCAGTCGATTAGCGAGATTCCTGTGACGGCAGTGGAACTTTGCGAGAACGGAGGGCAGTATGGTAAATTGTTGACACTCTGTTCCCGTGTTCTCAGGAAGGTTCTGAAACCTGAGCATGGAGAATCTTCGAGCAGCGCTTCTGAGGTGCTTAGGTCCCTTTCTCTGCTTGTTTTCATGCACAAATCGCAAGCAAGAACCTTCGCACTTGATTTTGTTAAGACGGAGATGATGAAAGTGGCGAAGGAGAACGATGGGGTGAAGAAGGCAATGGTTAATTTCCCAAGGTATTTGGTTAATAAGGCACCGGAGAAGGCTGAACCGCGAGCGTTGGCAGTGGAATCAATAACAGAGATTGTGCGTGTGATGGAGTTTGAAGATCAAGTTTCGTTTGTGAAGTACGTGGTTTCAATGTGTCGGGGGAAATCAAACCTCAGGCTCTTAGCAGTTGATCTTGTTCATAGCCTTGTAATGTCATTGAAGGATCCGTTGGGTTTGGATTCAGAAGAGGATGGTGGTGATGATCCCTGGGGGATATGGTGCTTGGAGGCATTGGTGAAACGATGTTCGGATGTTATTGCTGCAATTCGGGGGAGGGCTTTGGCAAACTTAGCTCAGCTGGTGAAGCTCTTATCAAGGAGTGATAGGAGTAGTGTGGTGCTGAAGAGGTTTATGGGGTTTGGTGATGGCAATGACGGTGTTGAAATGAATAATATGCTTAGGCAAAGGTGTATGGATGACAAGGCAGCTGTTAGGAGGGCTGCACTTCATCTTGTTACTAACTTGACTGCGCTTCTTGGTGGCACAATAGATGAGGTGGTGCTCAAGACAATGGGGTTGGCTTGTTCTGATCCCCTTATTAGCATGAGGAAAGCAGCAACTACAGCTCTTTCTGAGGCATTTAGAACATTCGCAGCAGAAACAGTAATCATTGAATGGCTACATTCAGTTCCACGTCTAATTACTGACAATGAAACTAGCATCCAAGAAGAATGTGAGAATATGTTTCAAGAACTTGTTCTGGACCGGATATGTAAAGCTGCATCTGCAACTTCATCACATAGTGAAACGATGTCAGCCAGAAAAAATAAAGAGAAAAGTTTCAACAAAGTGTTGGAGATGCTCTTTCCTAAAGGAGTTCTGTATCTTCTGAGGGAGATTTGCAATGGCGAGGTGAGCCCTTGGGTGAAAAAGATTTGCACAAACCTGGGCAAAAAGAAACGGTTGAATCACAAAATTGTTATTGCACTTCAGAATATAATCAGGACATCTGAGTCTATCTGGCTGAGCCATTCCTTGCCAATAGAAAAATGGACAGCGCCACCTGGTGCTTGGTTTCTTTTATCTGAGGTGTCTGCATTCCTTCCAAAAGCAGTGGACTGGGAGTTTCTTCATCATCATTGGCAGCTTCTTGACAAACATGAAGTTGAAGGCGAGTTTAGAAGCCCGTTTAAACAAGTAGAGGCATTTGAAAACGAAGAAAGCATAGAATGTGATGCTGTTGCCTGGGCTAGTGATCGAGTTTTCCTCTTACAAACAATCTCTAATGTATCTGTGGAGCTCCCTCCTGAACCTGCGGCTAATTTAGCTCATAACTTGCTCAAAAGAGTTGAAGAATTCAATATGCATTCAACAGAGGTTGATGCTCATGTGAAGGCACTTAAAACGTTGTGCAAGCGAAAAGCTTCGAATGTCACGGAGGCAGACACATTAGTCTTGAAATGGGTACATCAAGTACTTTCCAGAGCTTCTAAAATAATAGAGAAGTTCATTTCAGGGAATTCAAAGCAAAATGCAGAAAATAACTTTTTCACTCCACCTAGAAGTTGCTCTAGAAAAAGAAGGTCAATAGCAACATCCAAGTCATTGACAAAAGCAACTACAGCGATTTATACAATTGGATCTGCAGTAATTGTTTGCCCTACTGCTGATACGAGCACCATAGTTCCAATATTACATACTATCATCACTTCGGGGAGTTCTGGTCCCAAGATAAATAATCTAACGGGTCCTGCAACTTTTCTACAACAAGAAGCTCCTTCTTTCTATATTCAAGGGTGGTTAACCATGGGCAAGCTTTGCCTTGCTGATGAGAAGCTTGCAAAGAATTATATTCCACTGTTTATACAGGAGCTTGAAAAGAGTGAATCTGCAGCTCTTCGCAATAACATTGTGGTGATGATGGCAGATTTTTGTGTTCGGTACACTGCTCTGGTTGACGGTTATATAACAAAGATCACCAGGTGTCTCTTGGATCCCTGTGAACTTGTGAGAAGGCAAACCTTTCTATTGCTGTCCAGATTATTGCAGAGAGACTATGTGAAGTGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTATCACTTGTTGATGAATCAGAAAAGATTAGGCGGTTAGCAGAATTTCTCTTTGGAAATATTTTGAAAGTAAAGAGTCCTCTTCTAGCATACAATAGTTTTGTTGAGGCTGTTTTTGTTCTGAATGATTGCCATGCCCATCATGGACATCGCGAGTCCCAAGTATCACGAAGGGAAAGCCAAAGTTTTTCCATCAGGGGTAATGATGAACAGTCAAGGTCTAAAAGAATGCACATTTATGTTTGTTTACTGAAACAAATGGCTCCTGAGCATCTTCTAGCAACTTTTGCCAAGTTATGTGCAGAAATTCTGGCTGCTGCTTCGGATGGTATGCTCAACATAGAAGATGCAACTGGACAGTCTGTTCTACAGGATGCCTTTCGAATTCTTTGCTGCAAGGAGATTCGGATTCCATCGTCTCGCGCTTCATCATCCGAGTCAGCAGATATAGAGGAAGAAGGGGGAGAAAGTGGAGCTGCGGCTAGAGGAAAGGCTATAACTCAGGCGGTGAAGAAGGGTCTTATCCAAAACACAGTCCCAATCTTCATAGAGTTGAAACGATTATTGGAAAGCAAGAACAGTCCCCTTGTAGGGTCTCTCATGGAGTGCCTCCGAATCCTTCTCAAGGACTACAAGAATGAGATTGATGACATATTGGTTGCTGATAAGCAGCTGCAGAAAGAGCTTGTTTATGACATGCATAAATATGAGGCAGCAAGAGCCAAAGCAACAGTTGCTGAGGCAGCAGCGTCAACCAGGCCGAATACAGGTGCAAATCAATCACCTGAGGGTGCTGAGAATCCGGCCAAGGCGCAAGGACAAGACGGCAAGTTTCCAAGTGGTTCAAAAGTTGCTTCAGCAATGGCAGATGCAGCGGCTGCAGCTACAGCACGTTCTGTGCTGAGGGAAATTAATAGAGGTACAGGGACACCACCGTTAAGTTCTTTGAGTGTTCCTAAAGTCAGGTCTTGTACTGGTGTAATCAATGCTAGTCACGATAAGCAGCGGATGGATGATCTACAATCTCTGAAGAAAAGACACTGTTTTGATTCTGACGATGAAAGGTAA 4038 0.4609 MEEAISRLVAELDDLRHHSTTSSAAANPTPLSRQSLSDLNFLLSDANDTVPIDALYDELSAKSLSPSSLVPPLSAAMDSSPNPNHSLLASNAFLSLLLSPNAPVFTLFTPLSFLSLLRSLRRSLKASPAFTQPNSSKNRKRRRAGKASRKNPSQDDAGMDEEEENQENGGSSSVDVKALLVVLEKLASVMDLIHLDRFPESLRSLVQSISEIPVTAVELCENGGQYGKLLTLCSRVLRKVLKPEHGESSSSASEVLRSLSLLVFMHKSQARTFALDFVKTEMMKVAKENDGVKKAMVNFPRYLVNKAPEKAEPRALAVESITEIVRVMEFEDQVSFVKYVVSMCRGKSNLRLLAVDLVHSLVMSLKDPLGLDSEEDGGDDPWGIWCLEALVKRCSDVIAAIRGRALANLAQLVKLLSRSDRSSVVLKRFMGFGDGNDGVEMNNMLRQRCMDDKAAVRRAALHLVTNLTALLGGTIDEVVLKTMGLACSDPLISMRKAATTALSEAFRTFAAETVIIEWLHSVPRLITDNETSIQEECENMFQELVLDRICKAASATSSHSETMSARKNKEKSFNKVLEMLFPKGVLYLLREICNGEVSPWVKKICTNLGKKKRLNHKIVIALQNIIRTSESIWLSHSLPIEKWTAPPGAWFLLSEVSAFLPKAVDWEFLHHHWQLLDKHEVEGEFRSPFKQVEAFENEESIECDAVAWASDRVFLLQTISNVSVELPPEPAANLAHNLLKRVEEFNMHSTEVDAHVKALKTLCKRKASNVTEADTLVLKWVHQVLSRASKIIEKFISGNSKQNAENNFFTPPRSCSRKRRSIATSKSLTKATTAIYTIGSAVIVCPTADTSTIVPILHTIITSGSSGPKINNLTGPATFLQQEAPSFYIQGWLTMGKLCLADEKLAKNYIPLFIQELEKSESAALRNNIVVMMADFCVRYTALVDGYITKITRCLLDPCELVRRQTFLLLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLAEFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHHGHRESQVSRRESQSFSIRGNDEQSRSKRMHIYVCLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDAFRILCCKEIRIPSSRASSSESADIEEEGGESGAAARGKAITQAVKKGLIQNTVPIFIELKRLLESKNSPLVGSLMECLRILLKDYKNEIDDILVADKQLQKELVYDMHKYEAARAKATVAEAAASTRPNTGANQSPEGAENPAKAQGQDGKFPSGSKVASAMADAAAAATARSVLREINRGTGTPPLSSLSVPKVRSCTGVINASHDKQRMDDLQSLKKRHCFDSDDER* 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0350 1345 MobiDBLite consensus disorder prediction 128 171 - -
Amo04g0350 1345 MobiDBLite consensus disorder prediction 1322 1345 - -
Amo04g0350 1345 Pfam non-SMC mitotic condensation complex subunit 1 925 1102 IPR032682 -
Amo04g0350 1345 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 3 1333 - -
Amo04g0350 1345 PANTHER CONDENSIN 3 1333 IPR026971 GO:0007076
Amo04g0350 1345 Coils Coil 1198 1218 - -
Amo04g0350 1345 SUPERFAMILY ARM repeat 93 610 IPR016024 -
Amo04g0350 1345 Gene3D - 386 553 IPR011989 -
Amo04g0350 1345 MobiDBLite consensus disorder prediction 1317 1345 - -
Amo04g0350 1345 SUPERFAMILY ARM repeat 443 1203 IPR016024 -
Amo04g0350 1345 MobiDBLite consensus disorder prediction 1239 1257 - -
Amo04g0350 1345 MobiDBLite consensus disorder prediction 1041 1060 - -
Amo04g0350 1345 MobiDBLite consensus disorder prediction 1237 1274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0350 Amo-Chr4 6165020 6171431 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0350 K11491 - gmx:100793666 1783.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1472 14 24999302 25005479 Amo04g0350 04 6165020 6171431 hybridization