Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0331 ATGAGCAGTGAAGACGCKAAGAAGAACATTACTGGAGCTCTTATGCAGAGACCTATRCCCGACGACCGGAAGCCCTCGCCCKCAGCGCTTCCGGCGWCGGCGCCGCCACCCAAAAAGGTCATCATCAAGAGTGCAGATATGTTGCCCGACATGCAAAAGGAGGCTGTTGATATCGCCGTCAACGCGTTTGAGAAGTACAATGTGGAGAAAGATGTTGCAGAGCAGATAAAGAAGGAGTTCGATAAGAGGCATGGACCCACTTGGCATTGCATAGTTGGTCGCAATTTCGGTTCATATGTGACTCATGAAACAAACCACTTCCTTTACTTCTACTTAGACCAGAAAGCAGTTTTGCTCTTTAAGTCCGGCTAA 372 0.4839 MSSEDAKKNITGALMQRPXPDDRKPSPXALPAXAPPPKKVIIKSADMLPDMQKEAVDIAVNAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFLYFYLDQKAVLLFKSG* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0331 123 SMART Dynein_light_2 35 122 IPR001372 GO:0007017|GO:0030286
Amo04g0331 123 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 37 123 IPR037177 GO:0007017|GO:0030286
Amo04g0331 123 MobiDBLite consensus disorder prediction 1 36 - -
Amo04g0331 123 PANTHER DYNEIN LIGHT CHAIN 5 123 - -
Amo04g0331 123 ProSitePatterns Dynein light chain type 1 signature. 89 103 IPR019763 GO:0005875|GO:0007017
Amo04g0331 123 Pfam Dynein light chain type 1 39 122 IPR001372 GO:0007017|GO:0030286
Amo04g0331 123 PANTHER DYNEIN LIGHT CHAIN 5 123 IPR001372 GO:0007017|GO:0030286
Amo04g0331 123 SUPERFAMILY DLC 36 123 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0331 Amo-Chr4 5846758 5851270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0331 K10418 - gmx:100777142 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1451 14 24680653 24685400 Amo04g0331 04 5846758 5851270 hybridization