Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0328 ATGGAGATTCTCAAACTCATTACCATTAATTCACTCTCTTTTGCTTTCTTCTTCTTATACTTATTCTCTTGTTTTAAATTTACATCTTCAGATAGAGCGGAATTGCCCATTCTTGTGTTCAGTTGGTGGGATGATAAGAATACCTTCCATGCCGGTGAGACTGCAGCCATAAAGGTGAAAGTTCTTGAGCGTGCTGATATGATTGATAAAAAATGTTTCAAACCTATTGTAAGTGTTAATGGGAAAGAAGGGAACAGTTCTTATGTGTCTACTGTGTTGTTGAGTTTCAAAGGTAAACCCAGTGATGATTGGAAGATCTATTTCACTCCCATAAAGGTTGGAGTGTTCAATGTATTCATCAAAGATGACCATTATCAAGTCTATGACTCATCCTTGCATTTTCAAGTTGAGCCAGGGAATATGTACCCTTCTGTGTGTGTTGCATCATGGAATGGCATGAAACATGAGTACGAAGCTGGTGCAAAAGCTACCATCACGGTACTCCTCAAAGATGCATTTGGGAACAGTATCTCTAATAACAAGACAACTCAGGTGTCTTATTTGCCTGACTTTAAGTTGTTTGCGCTATATGAAAATAATGGTTCTATTGCTAGTATGCCAGACATATCCAATATTGGATGGAACGAGTTTGATTATGTTATCATTGAGTTTGTTGTTATTAAAGCTGGAAAATTCTCACTGTACATAGAAGGAGGGAATCAAACCTTGAATGGCTCTCCATTACCATTGAAAGTGAATTCAGGACCTGTAGATGTTTCTAAATGTGTTGCCAAATGGAACATTGATTCACATGCATGGCAATTGTCTTCTAAGATGGAAATCTTCATTCATCAATTAGATCAGTATGGGAATCTAGTTTCAGGGTTGTATCCTTTCGATGCAGAAGTCGTCCAAAGAGATACAAACTTGTCAATACCAATATCAGATCAACATTTTGAAGAAGTGGAAGCTGGAATTCAATTATTTTCATTTGGAAATTGGGAACCGGGAAAGTTCCTCTTAACACTATATGATGCCAAGCATAACAAAAGCATTTCCAATATGCCATATGCTTATTCTGTTTTTGTAGGTTATTGTGATGGAATAAAAAGTATTGTTAATGGATCTGGTTTGAATGATTCAGTAGCCGGCATAAAGCAAGAATTCTCTGTTTATTTGAATGATGTTTATGAATATCCTTCTCCTGTTGAAGTAGACATAGTTGAAGTACAAATTCTAAAAGAAAATGACTCGTATAGTGTTTCTCCATTCATTTATCCCATCCTAACTAAAAACGGTACTGTGTCAATTTCAAGAGTGCAACAATATGGTTTTATCAGTGAGATGAATGTTGCCCCTTCCCCTTCAATGGACCTTAATAACAATATTAACAGGAGTGAAAGCTCTATAGCTATGAGTGCCTTCCATGTAGATTACACACCTGAGAAAAGTGGTTTTTATGATATACATGTATATTGTGGAAATGTCTTATTGAATAAGGGTCATACACTCAGAAAAGAAGTAAAAGCAGGTGAAGTTAATGTTTCCTTGTCAAATGTGGTCAAGTTTTCTTCTAAGGTGGCAAAGATGTCAGAAAATGAAATACAAGTGCAGCTTATGGATTCATTTTCAAACCCTGTTCTTGCACAACAATCAAGGTTGAAGTTGGAGACTACTTCAGCTAACAAATCTCTTTTTCAAACTTTATACATTAAGGATAACAAGGATGGTTCATACAATTGTAGCTACATGGCTAAAGATGTTGGAACTTATGAGATTTGTGCTTCCTTTGATGGCAAGAATATTCTGCCATGTCCCTTCAGTATCAATGTGTATAGCAGTGAGTATTTTCCCAAAGCCAACAATGATATAGTATCTGTTTGGGAGGATCAATCAATTGCCATTGATGCTTTAGCAAATGATTACTTTGCTGGTGATAATGCAACTATAGTTCAATTCTCAAAACCAGACCATGGTTCACTTCTACAGAATGGAAGGATGTTTCGTTATACTCCATATAAATATTATTATGGAAATGATTCATTTTGGTACACAATATCTGATGTGAATGAAAACCTTGCTAATGCTTATGTAAACATATCTGTTCTCAATGTTCCACCACAATTTGCTTCTGTTCCAAGTGAACTACAAGCAACAGAAGATTTGATATGTCCTAGTTTTGGTGGCTTCTCTGGGTTTGAGATAGCATATTCAAATCCAATAGAGAATATTTCAGTTAATTTGAGTGCACAATTTGGAAGTATACTTTTGTTTCCTATGGTGATGCAATTTGGACAAGCAATGTGGAATGAACTTACCATAAATTCAGGGAATGAAACTGCAAGCAGTTTGCAACTACAAGGCACTGTGGAAGTAATTAATTATGCTCTTCACTCAATTCAGTATCTGGGAAATGAGAACTTTTATGGTGGAGATATTATTCAGGTTTCTGCTAAGAATAAGAATGGAATGAATTCATTGGGTGTTCCCATTTTCATTGACCCTGTCAATGATCCTCCATATATTAGAGTTCCCAACTTCATTGTATTGAAGAGTAATGAAGATGAGACCCTTATTTTTGACAAAGAGAAAGATAAGTTCAACTTTTCCATTGGAGATCCTGATCTTCCTAATTTCCCTGGAGGTCAAAGTAATTTTATGTTGACTTTCTCTATGGAAGTAAATGATGGTTTATTAGTAACAAATCTTCCATCTAACTTGATCAACACAACTGAAGTGAAGCACAAGGATAGTTATCAATGGCAGCCTCTTCAGACATATGTTACAATCTCAAAGCATTTCATGGTCAAAGCTACTGGAATCAGATTTCAGGGCACAGTCAACGACTGCAATGGTGTTATGGAGCAACTGTTTTTTCATGGTGGTGAGCATGGAGGTGTTTTGACATTGACATTGAATGACATGGGAAACCATGGATGTTATCCTAATTGTGCAGAGGGAATGTCAATGCCTTTATATACTGAGGCTATGGTTATTTTAATGAGAAAGCAACTAATGAGTTCATTTGTTGCTCACAGCTTAGGATCAATCATTGTCATTGAATTTGTTGTCATGTTCTCACTGGGAGTGCTGCTTTTATACTTCACATGCAAATGTGCAATTCTCCTTTTACATGAAAGAAGAAATCGTCACAAAAGCATGGTGGCAAGTCAACAATTGAAATCCAGCATGCCTCAAACTCAACATTTAAGCATTTTGTAG 3222 0.361 MEILKLITINSLSFAFFFLYLFSCFKFTSSDRAELPILVFSWWDDKNTFHAGETAAIKVKVLERADMIDKKCFKPIVSVNGKEGNSSYVSTVLLSFKGKPSDDWKIYFTPIKVGVFNVFIKDDHYQVYDSSLHFQVEPGNMYPSVCVASWNGMKHEYEAGAKATITVLLKDAFGNSISNNKTTQVSYLPDFKLFALYENNGSIASMPDISNIGWNEFDYVIIEFVVIKAGKFSLYIEGGNQTLNGSPLPLKVNSGPVDVSKCVAKWNIDSHAWQLSSKMEIFIHQLDQYGNLVSGLYPFDAEVVQRDTNLSIPISDQHFEEVEAGIQLFSFGNWEPGKFLLTLYDAKHNKSISNMPYAYSVFVGYCDGIKSIVNGSGLNDSVAGIKQEFSVYLNDVYEYPSPVEVDIVEVQILKENDSYSVSPFIYPILTKNGTVSISRVQQYGFISEMNVAPSPSMDLNNNINRSESSIAMSAFHVDYTPEKSGFYDIHVYCGNVLLNKGHTLRKEVKAGEVNVSLSNVVKFSSKVAKMSENEIQVQLMDSFSNPVLAQQSRLKLETTSANKSLFQTLYIKDNKDGSYNCSYMAKDVGTYEICASFDGKNILPCPFSINVYSSEYFPKANNDIVSVWEDQSIAIDALANDYFAGDNATIVQFSKPDHGSLLQNGRMFRYTPYKYYYGNDSFWYTISDVNENLANAYVNISVLNVPPQFASVPSELQATEDLICPSFGGFSGFEIAYSNPIENISVNLSAQFGSILLFPMVMQFGQAMWNELTINSGNETASSLQLQGTVEVINYALHSIQYLGNENFYGGDIIQVSAKNKNGMNSLGVPIFIDPVNDPPYIRVPNFIVLKSNEDETLIFDKEKDKFNFSIGDPDLPNFPGGQSNFMLTFSMEVNDGLLVTNLPSNLINTTEVKHKDSYQWQPLQTYVTISKHFMVKATGIRFQGTVNDCNGVMEQLFFHGGEHGGVLTLTLNDMGNHGCYPNCAEGMSMPLYTEAMVILMRKQLMSSFVAHSLGSIIVIEFVVMFSLGVLLLYFTCKCAILLLHERRNRHKSMVASQQLKSSMPQTQHLSIL* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0328 1073 PANTHER JITTERBUG, ISOFORM N 26 142 IPR044801 GO:0030036|GO:0051015
Amo04g0328 1073 PANTHER JITTERBUG, ISOFORM N 202 1001 IPR044801 GO:0030036|GO:0051015
Amo04g0328 1073 ProSiteProfiles Filamin/ABP280 repeat profile. 505 611 IPR017868 -
Amo04g0328 1073 SUPERFAMILY E set domains 533 614 IPR014756 -
Amo04g0328 1073 SUPERFAMILY E set domains 366 498 IPR014756 -
Amo04g0328 1073 PANTHER JITTERBUG, ISOFORM N 202 1001 - -
Amo04g0328 1073 PANTHER JITTERBUG, ISOFORM N 26 142 - -
Amo04g0328 1073 SMART flmn_3 524 614 IPR001298 GO:0005515
Amo04g0328 1073 Pfam Filamin/ABP280 repeat 365 496 IPR017868 -
Amo04g0328 1073 Pfam Filamin/ABP280 repeat 526 607 IPR017868 -
Amo04g0328 1073 Gene3D Immunoglobulins 362 513 IPR013783 -
Amo04g0328 1073 Gene3D - 614 701 - -
Amo04g0328 1073 Gene3D Immunoglobulins 514 613 IPR013783 -
Amo04g0328 1073 Gene3D Immunoglobulins 140 253 IPR013783 -
Amo04g0328 1073 Pfam Bacterial Ig domain 608 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0328 Amo-Chr4 5787634 5793078 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0328 - - ccaj:109808168 1658.27