Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0323 ATGACAAAAGATGCCTCGGAACCGGGTGGAAGTGGGGGTGGTGGCTTCCACGCGGTTCATGCGGAGCGTGACCTAGAGTCAAATTGGGAAGTTGACCTCGCCAAGAAACTCGAGGAGTATCTGCTGAAAATTTGCTCCGGGGAGATCACCGGCGAAGAGGAAGGACACATTCCAGTGAATTTTGCAGAAGCTGCTCTACTGCTTCAGGGATCGATACAGGTGTATAGTAGAAAGGTGGAATATCTATACACTCTGGTGTTGCGTGCTTTAGAGTTCCTTTCACAGAAAAGACAGCAAGATCATATAGATGGAGGATCAGACCAACATGATGAGAGTGGTCCCTCTGCTATTACCAATGAAGAAAATGATCAATTCTGGTGCTCGGATGACATCCCAGTTGAAGAGAGGAATTCCTTGGATGACTCTGCAAGCAAAGAAGTGAATTTGGACCACTTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATACTGCTGGTGATGGTGGGGAATTGGAGTCATATCTGTTGTCCACCACAGACTTGTACCAGGATTTTATTCTGTTGGATACATCAGATGCTGTTGCAGTGGATGAGTTTCTAAAGGATAGCAAAGCCAATGCAGCCCAAAATGTTGCTAATAGAGGAGCTTCAACTCGTAAAAGCTTTCTTTCTCCTACAAGGAATTCTGAAGGAGGTGCTAACAAATCTTCAGTGGCAAAAAGTCAGCATGCTAATTCCAACTGTTCCCCTAAAGTTGATTGCCATGACGATGATAATGTTCGGCCCAGTTCTCCCGTCTCTGGTGGTATTGATAATTGTGATTTTGGTTATAACATGGATGATGGATGCAATGCATTTAGGGATTCAGACAATTCAGATGTTGATGATGATGATCCATGGAAACCTTTGAATCCACATGAACCAGGCAACTTGAAAGTGAAGCCGTTTAGAAAAGTTAAAGGATTAAAGAAGAATGGAATTAATGTGAGACGGCGAGTATCAATGAGCATTTTGTTTCCACCTGCAAAATTGCATGGTCCTATTAGTCCAGAGCTCATGGCAATGTGGGAGATGCAGCATCATGCCCACGAACGACAAAAGGATTCTACATCTCTTCCACTATATGAGAAGCTTAGGCAGTCTCTTATCAATGAGGGGAGTAAAACCGATGGAGAATTTTTCAATGCAGAAGCTGATAATGATGACCATGAATTTGATACTGGAAATCCTGATTTTGATATGCCAGAGAATACATACATGGATGAAGATCTACCTCATAACAAAGAGAATGAAGTTAATGATGCTCATGCTGAGGGTGATGAAGATGTAGATAATGATGTTCCAAATTCTCAGGAAAGTTTAGAAGATCTCTGTCGCTCTCACCTGAATGCCCTTCTAGCTAGCATAGCTGAAACTGAGAAGCAAACAGAATTGGCCACTAGGGTTTCAACATGGAAACAAAGAATTGAGCACAGCTTGGAAGAAGAGGATTCCCGGCCACCATTTGATATTCATGAATATGGGGCGAGAATTTTGGACAAACTATCCCTTGAAGAAAGTAGTAGCTGTGTCCTATCCTTTTCTGATTTGGTTGAGGGACAAACAAAGTTCAATATTGCCCGAAGCTTTTCTTCTCTCCTTCAACTGGTGAACAATAGAGACGTGGACCTTCAAAGAAATGTCGACAATGGGAAACCTGTGTGCTACACGGCTGTTAACCCATTCCATGTTAGGCTCCTTAAGCATGACAAAGAACGGGAAGGCATGCAGTTTCGCTTGTCAAAAAAGAGACCAAAGTCTGCAACTAAAAAACCAGCTAAGAACAAAGATGGAAGGGGAAAGTCTCCCACCAATGGTTCATCAAGGGAATACGGACCAATGGGGATGTCACCACCGGCGAATTGCAAGATTTCATCGAAGCTCAGAAAGGTTAGTGCTATAAAGTTATCTCCTGAATCCAAGAGGAGGCGTAGATCTCAGTACGTCGAACCAGTTAACTTGCATTCGGGACGGTGA 2031 0.4328 MTKDASEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHIDGGSDQHDESGPSAITNEENDQFWCSDDIPVEERNSLDDSASKEVNLDHFIKPPANLVVLEGDCLDTAGDGGELESYLLSTTDLYQDFILLDTSDAVAVDEFLKDSKANAAQNVANRGASTRKSFLSPTRNSEGGANKSSVAKSQHANSNCSPKVDCHDDDNVRPSSPVSGGIDNCDFGYNMDDGCNAFRDSDNSDVDDDDPWKPLNPHEPGNLKVKPFRKVKGLKKNGINVRRRVSMSILFPPAKLHGPISPELMAMWEMQHHAHERQKDSTSLPLYEKLRQSLINEGSKTDGEFFNAEADNDDHEFDTGNPDFDMPENTYMDEDLPHNKENEVNDAHAEGDEDVDNDVPNSQESLEDLCRSHLNALLASIAETEKQTELATRVSTWKQRIEHSLEEEDSRPPFDIHEYGARILDKLSLEESSSCVLSFSDLVEGQTKFNIARSFSSLLQLVNNRDVDLQRNVDNGKPVCYTAVNPFHVRLLKHDKEREGMQFRLSKKRPKSATKKPAKNKDGRGKSPTNGSSREYGPMGMSPPANCKISSKLRKVSAIKLSPESKRRRRSQYVEPVNLHSGR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0323 676 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 303 IPR031719 -
Amo04g0323 676 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 4 664 IPR031739 GO:0030261
Amo04g0323 676 MobiDBLite consensus disorder prediction 216 272 - -
Amo04g0323 676 MobiDBLite consensus disorder prediction 591 676 - -
Amo04g0323 676 MobiDBLite consensus disorder prediction 100 121 - -
Amo04g0323 676 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 304 595 IPR031737 -
Amo04g0323 676 MobiDBLite consensus disorder prediction 216 254 - -
Amo04g0323 676 MobiDBLite consensus disorder prediction 652 667 - -
Amo04g0323 676 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0323 Amo-Chr4 5699274 5704145 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0323 K11490 - gmx:100786571 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1445 14 24585857 24590779 Amo04g0323 04 5699274 5704145 hybridization