Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0017 ATGAACATTAGCACAAGCAGTAACTTGGAGACGCGGTCTCTGCTTGATGAGCTCTGCAACTTCGACAAAGAGGGAATGTTGGATCTTGGCCACCCTCTTCTCAACCGCATCGCTGAGAGCTTTCTCAAAGCCGCCGGTGTAGGAGCAGTGCAAGCTGTGTCGCGTGAGGCTTATTTCACGGCCATTGAAGGTTGCGGGGCTGTTAATAATGGTGGGGCTTTACCGCCAGAAATTACAGGTGCAAAGAAGAAGAAGACGCAGTGTTTTTCAGGTCTAAAAGGAGAAACCAGCTGCAAGTCCCTTGAGGCACTGGTGAAGAACACTGGAAAAGAGTCCTTACAATGGGGATTGGCTGCTGGAATATATTCAGGTCTTACATATGGCTTGAAGGAAGCTCGCGGAGCTCATGACTGGAAAAATAGTGCAGTTGCTGGAGCAGTCACTGGGGCAACACTTGCACTAACATTGGAAGACTCATCTCATGAACACATTGTGCAGTGTGCTATCACTGGAGCTGCAATCTCCACTGCTGCAAATCTCCTCACTGGGATTTTCTGA 558 0.4892 MNISTSSNLETRSLLDELCNFDKEGMLDLGHPLLNRIAESFLKAAGVGAVQAVSREAYFTAIEGCGAVNNGGALPPEITGAKKKKTQCFSGLKGETSCKSLEALVKNTGKESLQWGLAAGIYSGLTYGLKEARGAHDWKNSAVAGAVTGATLALTLEDSSHEHIVQCAITGAAISTAANLLTGIF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0017 185 Pfam Tim17/Tim22/Tim23/Pmp24 family 34 175 - -
Amo04g0017 185 PANTHER OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC 7 185 - -
Amo04g0017 185 PANTHER TIM23 7 185 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0017 Amo-Chr4 227071 230049 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0017 - - adu:107483459 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1351 14 22256384 22259312 Amo04g0017 04 227071 230049 hybridization