Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2846 ATGGACTACTTGTCGTCCCGTAGAGACCGGAAGCTCGTTTCCCGGCGGCGGACGTGGTGCTGCTCATTTACCACCCCTCCGGCGAGCCCCGAAAACTCTTCATTCTCTCACACCAAATCGCCCCGCAACAAAACCGAAACGCTTTCATCATTATCGAAGCACACCACGCTCGCCTCCGTCCCCAACTCCCCTAAATCCCCCTTCCCCATCGTCTCTCGGATTGACCCTCGCCGGATCCTCTCTCCCGGAAGGGTCTCTCCCATCGACTCCGATCCCGCCGTCACGATTGAGCCCGAACCTGAACTACGATCCGCAAGCTTCCGTGCTCCCACTGCGCCGAGTTTCCGGTCGTCGCCGCCGGAGATTTTGGGCTCAGGTTCCAGTTCCAGTTCTGTTGAAGGAGTCAACAAGAATGGCTTTGATGTGAGATTGACTTTGAGAGGGAAGAGAGGAAGTTGCATGGTTCTGGAGGTTGATTCGGGAGTTCTGAGCGCGAACTCGGAGGTTTTTGCGGATTTGGTTGGCGATTACAAGAAGGGTTTGTCGCTGAAGAATTCGAGTGAAGCACCCAAGATGTGTAGAATGGAGGTTCCTGCAGTTGAGAACTTGGGTGTTTTCAGAGACACCATCGAGCTTATGTTCGAAGATGACGATGATGTCACAAAGAAGCTCATCAAGATTGGAGTCTATCGATCCATTGACATTTTGGAGGTTTCGGCAGGCATCATGTTCAACAAGGGGGTTTTGTCCTGTTTGAAATACCTTGAGGCTGTTCCTTGGACGGAGGAGGAAGAGGAGAAATTGAGAAGCCTCTTCACAAGATTTAAGTTTGATGATGCAACTGCAAGAGACATTCTAGCAAGACTGTACTTGCAAGATTCAACGGATTCCCAATTCCTGCCAAATATAGCGCGGCAACTAGTTTGGTCTATCAGCACTTGTGAGGATGCCAATGCAAGAACTGAACTCAAGTCCCTGATGAAGGGTCTTCTGTGTAACCATCTTGACATCAGCAAGGAGGATCTCTATGCTGTTTGCCGCTCATGTCTGGCTTCACTTGTTAGCCTCTTTGAGGAGACGTCTGACGCAATCCCTCCCAGAAGTTTCTTGGTAAAAACAGATTCGAGCAAGACTTTGATTGAGCGAATCTCAAGACAAGTCGATAACATCAACTGGTTGCTAGAAATTATGCTTGATGGGCAAGTAGCAGATGACTTTGTGAATATATGGGCAGATCAGCAGCAACTTGTTGGAATGCATGAAAATGCATCCCCCATGATCAGATACGAACTCAGCCGAGTGTCGGCGGTTCTGATTATTGCCATGGCTACAAGAAAACTACAATGCAGGTTGGAAGTGAGATCAGGGCTTCTCCAAGCATGGTTTAGGCCTATGCTGTTGGACTTTGGTTGGTTACAGAGATGCAGGAAAGGACTTGACATGAAGGCCATGGAGGAGGCCATGGGACAGACACTTCTTACGTTACCTTTGAAGCAACAACATGTGCTGTTTATGGTTTGGTTTAGGTATTTCTCAAGTCATGGCACTGAATGTCCAAATCTAAGCAAGGCATTCCAAATATGGTGGCGCAGATCATTTTTAAGAGGCTCTGAAACTTATGCCATTGAATCAAGATGA 1638 0.4841 MDYLSSRRDRKLVSRRRTWCCSFTTPPASPENSSFSHTKSPRNKTETLSSLSKHTTLASVPNSPKSPFPIVSRIDPRRILSPGRVSPIDSDPAVTIEPEPELRSASFRAPTAPSFRSSPPEILGSGSSSSSVEGVNKNGFDVRLTLRGKRGSCMVLEVDSGVLSANSEVFADLVGDYKKGLSLKNSSEAPKMCRMEVPAVENLGVFRDTIELMFEDDDDVTKKLIKIGVYRSIDILEVSAGIMFNKGVLSCLKYLEAVPWTEEEEEKLRSLFTRFKFDDATARDILARLYLQDSTDSQFLPNIARQLVWSISTCEDANARTELKSLMKGLLCNHLDISKEDLYAVCRSCLASLVSLFEETSDAIPPRSFLVKTDSSKTLIERISRQVDNINWLLEIMLDGQVADDFVNIWADQQQLVGMHENASPMIRYELSRVSAVLIIAMATRKLQCRLEVRSGLLQAWFRPMLLDFGWLQRCRKGLDMKAMEEAMGQTLLTLPLKQQHVLFMVWFRYFSSHGTECPNLSKAFQIWWRRSFLRGSETYAIESR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2846 545 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 7 545 IPR038920 -
Amo03g2846 545 MobiDBLite consensus disorder prediction 21 66 - -
Amo03g2846 545 MobiDBLite consensus disorder prediction 21 134 - -
Amo03g2846 545 MobiDBLite consensus disorder prediction 110 134 - -
Amo03g2846 545 PANTHER OS04G0278000 PROTEIN 7 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2846 Amo-Chr3 119386839 119389110 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2846 - - aip:107633608 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3749 13 126628326 126630681 Amo03g2846 03 119386839 119389110 hybridization
Amo03g2846 03 119386839 119389110 Amo10g2084 10 74669977 74671908 PCT
Amo03g2846 03 119386839 119389110 Amo20g2574 20 120523282 120526088 PCT
Amo10g2084 10 74669977 74671908 Amo03g2846 03 119386839 119389110 PCT
Amo20g2574 20 120523282 120526088 Amo03g2846 03 119386839 119389110 PCT