Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2112 ATGGGCTTCTCTCTAACACCAACCCCTACCTCTCTCCTCCACCACCCCAACCTCACACGCCGCTCCCTCCTCTTCCTCGCCACCACTACCACCACCCTCTCCGTCCCTCTCGCCCCTACCCTCTCCGCCACCACCACCACACCACCCCAGCCTCCCAACCCCACCATCACCGACCGCATCTTCATGGACTTCAGCCTCTGTCCCAACTACTTCCTCCCCAACCGCACCCTCGGTGACAACCTCTCCACCCTCTGCTCCGACTCCACCCCACTGGGGCGCATCGTCCTGGGCCTCTACGGCAACCTCCTCCCCCTAACCGTCTCAAATTTCAAGTCCATGTGCCTCGGCTCCAACTCCACCGCTTCCTCCTACAAGAACACTCTCGTCCACAAGATCTTTCCTGGACGCTACTTCCTTGCCGGCCGGCAGGGCAGGCCTGACAAGGGCGAGGTCCGCCCACCCCATGACCTCGCCCGTAATACCGAGACTGTCGACTCTAAGGCCTTCTCCCTGATGCACTCACGGCCCGGCGTCGTTTCGCTCTCGCTTTCCGAGAACGACGACGATGACGAGATCAAGCTTGACCCTGGTTACCGCAACGTTGAGTTCCTGATCACCACTGGACCTGGCCCTTGTCCTGACCTTGATTATAAGAACATTGTCTTTGGAACCGTGCTAGAAGGTTTGGACGTTGTCACAGCGATAGCTTCCATTCCGACTTACCAACCATCTGAACGAATTCGCCAGTTTAATGACTTGGCTGAGTTTTTTGGAGATGAAAGGGCTCAGAATGCTCGTGCCACATGGAACAGGCCACTTACAACTGTCTACATTAGTGACTGTGGAGAGCTAAAAGTTACACATCCTCCCCTCTCACCATCTCTTCCATAA 891 0.5668 MGFSLTPTPTSLLHHPNLTRRSLLFLATTTTTLSVPLAPTLSATTTTPPQPPNPTITDRIFMDFSLCPNYFLPNRTLGDNLSTLCSDSTPLGRIVLGLYGNLLPLTVSNFKSMCLGSNSTASSYKNTLVHKIFPGRYFLAGRQGRPDKGEVRPPHDLARNTETVDSKAFSLMHSRPGVVSLSLSENDDDDEIKLDPGYRNVEFLITTGPGPCPDLDYKNIVFGTVLEGLDVVTAIASIPTYQPSERIRQFNDLAEFFGDERAQNARATWNRPLTTVYISDCGELKVTHPPLSPSLP* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2112 296 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 91 245 IPR002130 GO:0000413|GO:0003755
Amo03g2112 296 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Amo03g2112 296 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 232 IPR002130 GO:0000413|GO:0003755
Amo03g2112 296 SUPERFAMILY Cyclophilin-like 84 284 IPR029000 -
Amo03g2112 296 CDD cyclophilin 89 248 - -
Amo03g2112 296 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC 14 296 IPR044178 -
Amo03g2112 296 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 81 283 IPR002130 GO:0000413|GO:0003755
Amo03g2112 296 Gene3D - 57 288 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2112 Amo-Chr3 78834491 78836689 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2112 K03768 - gmx:100816868 433.721