Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1711 ATGACTTCTATAATAATAAGGATAAAGAATGCAATAAAGGAAATACCTTGTATAAGTATACTAGATCCGTTGGATAAATTAATTGTAGAAACAGATGCAACAGAATTAGGATATGGAGGAATTCTTAAACAAATACCTCCTAAAAGTTCAAAAGAACAAATAGTAAAATATCATTCAGGGATTTTGAACCAGGCTCAAAAGAATTATCCAATAGTCAAAAAAGAAATACTTGCCATACTATTATGTGTCACAAAATTTCAAGAAGATTTATTTAATAAAACATTTTTAATAAGAACTGATTGTAAGGCAGCCCCAATTTCAAAACAAATATTTGCAAGATGGCAGGCTATTTTATCATGTTTCGATTTTACTATTGAACATATAAATGGAGAACAAAAGGCAGCCTCCAGTGAAGATTATGACACCAAATCAATTAAATTAACACATTATAGGAATTTGAACACCAAACAGCCTATTTATTCAAAGATAAAAATCATAAAAATATTATCTTTACAAGAGTGGGAAATACCTCCATATCAGTCTAAGAGTTTCTCACTAAAATTCGAACCCCAGAACTATACCTACTATGATTACCAAGAAGCCTGGAATCAGATGTTATTTCTATCACCAAGTTCCCATTCTTGGTTCATTTGGTTTAGAAATGGGATATCATTACAATTTCCCAAATGGTTCCAAGCATGGTTCCAGAATTTTGGAACAATAGAAGCTTTCTTCCCAAAAGAAGGCAGTATGGCGTATGAATATTTTAAAAGCAAGTTAACATTCTTACAAGAATACAAATTCATTTCATTCATAGCAGCCATAGTAATAAAAATAAAATGGTGGAACAAATATGATATAAGTTTACTAAGAAGAGCAGCTATTGATCAATGGTTAACAACATCACAAAAGCGTACAATAATAATAGCCTCAAGCACCACCAATGAACAAATAGCTTATAAAAAAGAGACCCAATTCTTAACACAGAAGCGACAAATTATGGCAGTCCTAGCGGCAGCAACCTCAGAGGAAGATATCCATAGCTCTCTACAAGCAATACAAATAGTACCTCTTGGGAAAGATGAGGAAGTCCAATCCAGCCCAACTCATTACTACCAAGACTCTCAAGATCCATTTGAAATGTAG 1146 0.3255 MTSIIIRIKNAIKEIPCISILDPLDKLIVETDATELGYGGILKQIPPKSSKEQIVKYHSGILNQAQKNYPIVKKEILAILLCVTKFQEDLFNKTFLIRTDCKAAPISKQIFARWQAILSCFDFTIEHINGEQKAASSEDYDTKSIKLTHYRNLNTKQPIYSKIKIIKILSLQEWEIPPYQSKSFSLKFEPQNYTYYDYQEAWNQMLFLSPSSHSWFIWFRNGISLQFPKWFQAWFQNFGTIEAFFPKEGSMAYEYFKSKLTFLQEYKFISFIAAIVIKIKWWNKYDISLLRRAAIDQWLTTSQKRTIIIASSTTNEQIAYKKETQFLTQKRQIMAVLAAATSEEDIHSSLQAIQIVPLGKDEEVQSSPTHYYQDSQDPFEM* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1711 381 SUPERFAMILY DNA/RNA polymerases 7 127 IPR043502 -
Amo03g1711 381 CDD RNase_HI_RT_Ty3 28 132 - -
Amo03g1711 381 PANTHER ENZYMATIC POLYPROTEIN-RELATED 2 259 - -
Amo03g1711 381 Pfam RNase H-like domain found in reverse transcriptase 7 97 IPR041577 -
Amo03g1711 381 PANTHER REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED 2 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1711 Amo-Chr3 49149531 49151159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1711 - - adu:110275269 404.445