Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1705 ATGGCTTGTGTGAAATTGGGTTCCAAACCTGATGCTTTCCAACGTCAAGGGCAAGCATGGTTCTGCACAACTGGGCTTCCCAGTGACATTGTTGTTGAAGTGGGTGAAATGTCCTTCCATCTTCATAAGTTCCCTTTGCTCTCTAAAAGTGGGGTTTTGGAGAGACTGATTGCAGAAGCTTCTGAGTCTAAGGAAGAATCTGTCATACACCTACCTGACATTCCTGGTGGGGCCAAGACATTTGAACTTGTCGCAAAATTCTGCTATGGTGTGAAACTTGAACTTACAGCTTCAAATGTTGTGTACCTGTGGTGCGCTGCCGGGAATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTGTTTCACAAGCTGAAACCTTTTTCAATCAAGTGGTCCTCCGAAATTGGAAAGACTCTCTCAGAGCACTTCAAACCTGTGATGATGTTCTGCCATTTGCTGAAGAGCTCCACATTGTGAAAAGGTGCATTGAATCACTTGCTGCAAAGGCATCTACTGACCCAAATTTATTTGGGTGGCCCGTGCTGGAGCATGGTGGACCCATGCAAAGCCCTGGTGGAAGTGTTTTGTGGAATGGGATAAGTACTGGGGCGAGGCCAAAGAATTCAAGTTCAGATTGGTGGTATGAGGATGTAACAATTTTGAGTTTACCAATTTATAAGAGGTTGATAACTGTCATGGAATCTCGAGGAATTAGGCGGGAGATCATTGCTGGTTCTCTTGCTTCCTATGCTCAAAAGTATCTGCCTGGGTTGAACCGACGTAAGGTTTCTGGCGAGACCAGCAGCCATCTGGCACCATTGGCTTTGGGATCTCCTCCGTCTGAAGAAGACCAGAAGATTCTGCTGGAAGAGATTGATCGGCTACTCCCAGTGCAAAAGGGCCTGGTCCAAACAAAATTCCTTTTTGGTCTACTTCGAACAGCTATGATTCTAAAAGTGAGCCCCAGTTGCATATCAAATTTGGAGAAGCGGATTGGTATGCAGCTTGATCAAGCTAATCTGGAGGATCTCTTGATGCCTAGTTTCTCATATTCAATGGAGACACTTTACAATGTTGATTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCACGGATCAGGTTACCGGTGCCACTTCTCCATGTTCAGTTGATGATGGCCAATTGATTGGATCACCTTCATTGGCTCCAATCACCATGGTAGCAAAGCTGATTGATGGTTACCTGGCAGAGGTTGCACCAGATGTTAACTTAAAACTTCAAAAGTTTCAAGCAATTGCTGCTGCTGTTCCAGATTATGCCAGACCTTTGGATGATGGTTTATATCGTGCTATTGACATTTATTTGAAGTCTCACCCATGGTTGGTGGAGTCTGAGAGAGAGCAACTGTGTCGGCTGATGGACTGCCAGAAGCTCTCATTAGAAGCCTGCACTCACGCCGCACAGAATGAGAGGCTACCAATCAGAATAATAGTTCAAGTCCTATTTTTCGAGCAGCTCCAGCTTCGAACTTCCATCGCGGGTTGCTTCCTAGTTTCTGATAATCTCGACGGATCGAGACAACTAAGAAGTGATTTGGTTGGATCTAACGAGGGTGGCTGGGCATCAGCCGTGAAGGAAAACCAGGTATTAAAAGTTGGAATGGATAACATGCGGATGAGGGTATCTGAGCTTGAGATGGAGTGCTCAAACATGAGGCAGGAAATCGAGAAATTGGCTCGCACAAAGGGATCAAGCGCTTGGGGTACCGTGTCTAAGAAGCTTGGGTTTAAGATGAAGTCTCAAATGTGCAGTGCTCAAGAAGGATCAGTTAGTAACAATAAGAATAATAATCACAGTGGAAATATTAAGGTTGAGAAGTTGAAGGATAGACATTCAAAGCACAAGAGAAGTTCTTCTATTAGTGACAAAGCATCGGTCTCTTCAATTGTTCCTTCTAAGTAA 1947 0.4448 MACVKLGSKPDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSKSGVLERLIAEASESKEESVIHLPDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAGNLEMTEEYGEGNLVSQAETFFNQVVLRNWKDSLRALQTCDDVLPFAEELHIVKRCIESLAAKASTDPNLFGWPVLEHGGPMQSPGGSVLWNGISTGARPKNSSSDWWYEDVTILSLPIYKRLITVMESRGIRREIIAGSLASYAQKYLPGLNRRKVSGETSSHLAPLALGSPPSEEDQKILLEEIDRLLPVQKGLVQTKFLFGLLRTAMILKVSPSCISNLEKRIGMQLDQANLEDLLMPSFSYSMETLYNVDCVQRILDHFLATDQVTGATSPCSVDDGQLIGSPSLAPITMVAKLIDGYLAEVAPDVNLKLQKFQAIAAAVPDYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSDLVGSNEGGWASAVKENQVLKVGMDNMRMRVSELEMECSNMRQEIEKLARTKGSSAWGTVSKKLGFKMKSQMCSAQEGSVSNNKNNNHSGNIKVEKLKDRHSKHKRSSSISDKASVSSIVPSK* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1705 648 Coils Coil 549 576 - -
Amo03g1705 648 CDD BTB_POZ_NPY3-like 19 122 - -
Amo03g1705 648 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Amo03g1705 648 Pfam NPH3 family 213 478 IPR027356 -
Amo03g1705 648 Gene3D Potassium Channel Kv1.1; Chain A 20 173 IPR011333 -
Amo03g1705 648 PANTHER - 1 616 - -
Amo03g1705 648 MobiDBLite consensus disorder prediction 600 648 - -
Amo03g1705 648 MobiDBLite consensus disorder prediction 600 615 - -
Amo03g1705 648 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Amo03g1705 648 SUPERFAMILY POZ domain 16 114 IPR011333 -
Amo03g1705 648 PANTHER OS12G0117600 PROTEIN 1 616 IPR043454 -
Amo03g1705 648 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1705 Amo-Chr3 48650970 48655781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1705 8 635 EF-hand Containing Proteins AT3G44820 46.789 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1705 - - adu:107479347 1241.1