Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1690 ATGCCTCCATTACGCTCCAGTGGATTTGTTGATCCCGGTTGGGATCATGGTATTGCCCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTATTGTGGGAAAATAGTTAGTGGTGGCATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATATTGTGAAAAGGCTCCTGAGGAAGTCTACTTAAGAATGAAGGAAAACCTGGAAGGGTGTCGATCCAACAAGAAACAGAAGCACATTGATGCTCAAGCATATATGAATTTTCAGTCTAATGATGATGAAGATGATGAAGAGCAAATTGAGTGTAGAAGCAAAGGGAAGCAGTTGATGGATGATAGAAGTGTATCTATAAACTTTACACCTCTTCGTTCATTAGGATATGTTGACCCAGGGTGGGAACATGGTGTTGCTCAAGATGAGAGAAAGAAGAAAGTGAAATGCAACTATTGTGAGAAAATTGTTAGTGGAGGTATTAATCGGTTTAAACAGCATCTGGCTAGAATTCCTGGAGAGGTAGCACCTTGTAAAAATGCTCCTGAAGAAGTTTATCTTAAGATTAAAGAGAATATGAAATGGCATCGCACTGGAAGGAGACATAGGCAACCTGAGGCTAAGGAATTGATTCCTTTCTATGCAAAATCAGTTAATGATGATGATGATGATGAAGAAGAAGAAGATGAATATGAGCAGATGGAAGATGCTTCGCATCATGTGAACAAGGAAACATTGATTGATGTTGATAACAGATTGTCTAAAGGCTTTAGGAAGACCTTCAAGGCAATGCCGCCAAGTACTGGTCCTGAACCTGTATTGAGAAGATCTAGGTTGGATAACATATACCTGAAACTGCCCAAGAATCAGCCTCCTCAAGCTTTCAATCAAGTCAARGTTAAGRCTGGGCCCACTAAAAAATTGCGCAAGGAAGTCATTTCTACAATTTGCAAGTTCTTTTACCATGCTGGGATTCCTKTACAGGCTGCAGACTCCTTATATTTTCATAAAATGCTTGAAGTTGTTGGTCAATATGGACAGGGACTGGTATGTCCACCAAGCCAACTTATGTCTGGTCGCTTTTTGCAGGAGGAAATAGATTCCATTAGGAATTATCTCGTCGAATACAAGGCTTCCTGGGCAATTACTGGTTGTTCTGTAATGGCAGATAGTTGGAGAGATGTACAGGGAAGRACAATTATTAACTTTCTTGTTTCTTGTCCTCATGGCGTATACTTTGTTTCTTCAGTTGATGCTACTAATGTAGTAGAAGATGCACCAAATCTATTCAAGCTTCTGGACAAGGTGGTGGAGGAAATAGGTGAGGAAAATGTGGTGCAGGTCATAACTGAAAATACTCCCAACTATAAAACTGCTGGGAAAATGCTTGAAGAGAAGCGAAGGAATTTGTTTTGGACTCCTTGTGCCACTTATTGTATTAATCGAATACTAGAAGATTTTATGAAGATAAGATGTGTGGAAGAGTGCATTGAAAAAGGCCAGAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAATGAATTTACTGAGGGGCAGGAGCTTTTAAACACAGCTGGGACACAGTATGCCTCTAGCTTTGCTACATTGCGGAGCTTGTTGGATCATAGAGTTGGGCTCAAAAGAATGTTTCTATCAAACAACTGGATTTCATGCAGGTTCTCCAGGACAAATGAGGGGAAAGAGGTGGAAAAAATTGTCTTGAATGTCACGTTTTGGAAGAAAATGCAGTATGTTAGAAAGTCAGTAGATCCCATCATGCATGTACTTCAAAAGGTTTGTAGTGGTGAGAGCTTCTCGATGCCATACATATATAATGATATGTACCGAGCAAAACTTGCAATCAAATCTGTTAATGGTGATGATGCACGTAAATATGAACCATTCTGGAAGGTGATAGACAGTCATTGTAACTCTCTGTTTTGTCACCCACTTTACTTGGCTGCGTACTTCTTGAATCCCTCCTACAGGTATCGGCAAGATTTTGTGGCGCATTCTGAGGTAGTCCGGGGGCTCAATGAATGTATTGTTCGGCTAGAGCCAGACAATATGAGACGGATATCTGCATCAATGCAGATTGCTCATTATAATTCTGCACAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGATCTTGAACCAGCTGCGTGGTGGCAACAACATGGAATAAGCTGCATAGAGTTGCAAAGGATAGCTGTGCGCATATTAAGTCAGACATGCTCAACCTTTGTGCGTGAGCATGAGTGGAGTATATATGATCAGATATACAGTAAAAGTCAAAATCGTCTAACACAGAAGAAACTGAATGACCTTATCTACGTGCACTACAACTTGCGACTTAGAGAATCCCAATTAAGAAAAAGGTCTAGGGACTCAAGGTCAACCTCTGTTGACAATGTTCTGCTAGAGCACTTACTCAAGGATTGGATAACGGACACCAATTTACAAAGCTCTGATGTTGATAAGAACATCTATGATGGAATTGAACAAGATGATCAATATGAAAATGATTTAATTGATTATGATGATGGAGCTGCACGATCTTTGAAGGGAACGCTTGAGCTGGAAACTATGGCTGATTTAGCAGTAGGATCACCGGATGTAGACCATGCTAACATTAATGCTGCCACTGACAATGACTCTGATCTTAATTATTTTGATGATGATTTGAGCGAGTAA 2727 0.3968 MPPLRSSGFVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLRMKENLEGCRSNKKQKHIDAQAYMNFQSNDDEDDEEQIECRSKGKQLMDDRSVSINFTPLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKIVSGGINRFKQHLARIPGEVAPCKNAPEEVYLKIKENMKWHRTGRRHRQPEAKELIPFYAKSVNDDDDDEEEEDEYEQMEDASHHVNKETLIDVDNRLSKGFRKTFKAMPPSTGPEPVLRRSRLDNIYLKLPKNQPPQAFNQVKVKXGPTKKLRKEVISTICKFFYHAGIPXQAADSLYFHKMLEVVGQYGQGLVCPPSQLMSGRFLQEEIDSIRNYLVEYKASWAITGCSVMADSWRDVQGRTIINFLVSCPHGVYFVSSVDATNVVEDAPNLFKLLDKVVEEIGEENVVQVITENTPNYKTAGKMLEEKRRNLFWTPCATYCINRILEDFMKIRCVEECIEKGQKITKLIYNQIWLLNLMKNEFTEGQELLNTAGTQYASSFATLRSLLDHRVGLKRMFLSNNWISCRFSRTNEGKEVEKIVLNVTFWKKMQYVRKSVDPIMHVLQKVCSGESFSMPYIYNDMYRAKLAIKSVNGDDARKYEPFWKVIDSHCNSLFCHPLYLAAYFLNPSYRYRQDFVAHSEVVRGLNECIVRLEPDNMRRISASMQIAHYNSAQDDFGTELAISTRTDLEPAAWWQQHGISCIELQRIAVRILSQTCSTFVREHEWSIYDQIYSKSQNRLTQKKLNDLIYVHYNLRLRESQLRKRSRDSRSTSVDNVLLEHLLKDWITDTNLQSSDVDKNIYDGIEQDDQYENDLIDYDDGAARSLKGTLELETMADLAVGSPDVDHANINAATDNDSDLNYFDDDLSE* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1690 908 Pfam Protein of unknown function (DUF 659) 353 504 IPR007021 -
Amo03g1690 908 PANTHER OSJNBA0013A04.12 PROTEIN 44 845 - -
Amo03g1690 908 PANTHER OSJNBA0013A04.12 PROTEIN 11 49 - -
Amo03g1690 908 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Amo03g1690 908 MobiDBLite consensus disorder prediction 220 234 - -
Amo03g1690 908 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Amo03g1690 908 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Amo03g1690 908 Pfam hAT family C-terminal dimerisation region 722 794 IPR008906 GO:0046983
Amo03g1690 908 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Amo03g1690 908 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 44 845 - -
Amo03g1690 908 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 49 - -
Amo03g1690 908 SUPERFAMILY Ribonuclease H-like 378 796 IPR012337 -
Amo03g1690 908 MobiDBLite consensus disorder prediction 219 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1690 Amo-Chr3 47566788 47572857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1690 - - aip:107630570 1803.88