Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1671 ATGAATACTTCTTCTCTCTCCTTCCTTCAATCAGCGTTCCCCACTTCCTCCTCCTTCCTCCCACCGAACCCGCTAACCCCTTCCTTCTGTTTCGTCGTTGAAGCCCATTCCACCACCCGCCGACAAGACAGGACCGCCCGCCACACCCGCATCAGGAAGAAGGTTGAAGGGACACCAGAAAGGCCACGATTGTCCGTGTTCCGATCCAACAAGCATCTTTCTGTCCAGGTCATAGATGACACCAACATGCACACTCTTGCTTCGGTTTCAACAATGCAGAAGGCAGTTTTTGAAGAGTTCAACTACACAGCTGGTCCTACAGTTGAAGTAGCAAAGAGGGTTGGTGAAATCATTGCAAAGTCCTGTCTGGAGAAAGGGATTACAAAGGTGGCCTTCGACCGAGGTGGATACCCGTACCATGGTCGTGTTCAAGCACTCGCAGATGCAGCTCGCGAACATGGCCTAGAGTTCTAA 474 0.5148 MNTSSLSFLQSAFPTSSSFLPPNPLTPSFCFVVEAHSTTRRQDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTNMHTLASVSTMQKAVFEEFNYTAGPTVEVAKRVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAAREHGLEF* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1671 157 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 26 157 - -
Amo03g1671 157 TIGRFAM L18_bact: ribosomal protein uL18 40 157 IPR004389 GO:0003735|GO:0005840|GO:0006412
Amo03g1671 157 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 39 157 IPR005484 GO:0003735|GO:0005840|GO:0006412
Amo03g1671 157 CDD Ribosomal_L18_L5e 51 155 - -
Amo03g1671 157 SUPERFAMILY Translational machinery components 40 155 - -
Amo03g1671 157 Gene3D - 38 157 - -
Amo03g1671 157 Hamap 50S ribosomal protein L18 [rplR]. 39 157 IPR004389 GO:0003735|GO:0005840|GO:0006412
Amo03g1671 157 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 26 157 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1671 Amo-Chr3 46644223 46646950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1671 K02881 - gmx:100778569 245.743