Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1612 ATGTCTCCGTCAGTCGTCGAAACCGGCGGCCTCCGACCGGTGAAAATAAACGGTTTTCACAATGAAGACGACCATGCATCTTCCGACTGCAAACACTCCAATGGATCTCTTCCCTCGACGACGTCGTCATCGAGGATCATCGTCGACGCAATTCCGCCGAAGGAGTTTGAGAAGCTTCGGAGAGTCCTCGTTGCTTCGGCGAAAGGGTTCTCAATCGGAGCGGGCATCAAGGGAGGCCTCGCGGTCTTCGCGATCTTGTCTCGATTGACGCGAAAGCAACGGCAAAGGAAGGAGCTTGCGGTGACGAACGGCGAAGCGATTGTAGCTGCTGTGAAGGAGACTCTGAGATACGGTTTGTTCCTTGGAACCTTCGCCGGAACGTTTGTTTCCATGGACGAGCTTATTGGTGCTCTCGGAGGTCACCGTAGGACAGCAAGGTGGAGAGCCTTCCTGGCAGGGGCTCTTGCTGGGCCATCCATGCTTCTGACTGGTTTGGAGACACAGCACACGAGCTTGGCCATTTATATTCTCATGCGTGCTGCTGTGTTAGCGTCTCGGTGTGGGATCAAGAGCAAGCGGTTTGGGAGATATTGCAAGCCTCTCACCTGGAAGCATGGAGACATATTCCTCATGTGCCTATCCTCCTCCCAAATATTGTCTGCTTATATATTAAAGCAAGAGAGTTTGCCKTCTTCATATAAGTCTTTCCTTAATAAACATGGTGGGAAGGATGCAGTTATCCTACAAGGTGTAAAGGAGATAGCCAGTGGCAAGCCTTTTACTAATTTGGAAGCAATAGAGAASTACTACAAGACCATTGGTGTTGATGTGAAATTAGATCCAAGTATGAAAGTCCCATGCTCGATTGTACATGGGAATCAATCATGTGGAGAACATATCCTTTCTTTTCTTGTTGAAGCCTACAAGAGAGCATTACCTGTTTATCTTCCAGTTTATCTGATACCTGCCCTAATAGTTCACAGAAATGGACTTTTGAAAAGGCCTAACACAATATTGGCCAAAGGTCTTCTTGGCACKGCAAGATCAAGCTTATTTTTATCTGTTTATTGRGCATCTGCCTGGATGTGGACGTGCTTTCTGTTCAGGATCTTCAAAAGATGTAATATTCCAATGGTGGCCATGGGAACATTCCCAACGGGCCTTGCATTGGCTATTGAGAAGAAAAGCAGGCGAAGAGAGATATCATTATACTGCTTTGCACGGGCCATCGAGAGTTTCTTCACATGCTTAGCAGATGCAGGATATCTCCCTCACTCAAGGAGAATCAAGAGAGCTGATGTAGTAGTTTTCAGCTTGTCAACAGCTATCATAATGCACTGCTATGCTGAGGAGAGGGATGTTTTCAGATCCAAATATCTTAATGTTCTTGACTGGGTATTTGGTGTYCCGCCTCCTCCATGTGAAACCCCGCGGTGCAACCCACAGGGCAAAGGGACAACAAATATGCCAGCACCAGCAGAGTATTCTTTACCCGGGAAAATTGCACTTGACTAG 1515 0.4719 MSPSVVETGGLRPVKINGFHNEDDHASSDCKHSNGSLPSTTSSSRIIVDAIPPKEFEKLRRVLVASAKGFSIGAGIKGGLAVFAILSRLTRKQRQRKELAVTNGEAIVAAVKETLRYGLFLGTFAGTFVSMDELIGALGGHRRTARWRAFLAGALAGPSMLLTGLETQHTSLAIYILMRAAVLASRCGIKSKRFGRYCKPLTWKHGDIFLMCLSSSQILSAYILKQESLPSSYKSFLNKHGGKDAVILQGVKEIASGKPFTNLEAIEXYYKTIGVDVKLDPSMKVPCSIVHGNQSCGEHILSFLVEAYKRALPVYLPVYLIPALIVHRNGLLKRPNTILAKGLLGTARSSLFLSVYXASAWMWTCFLFRIFKRCNIPMVAMGTFPTGLALAIEKKSRRREISLYCFARAIESFFTCLADAGYLPHSRRIKRADVVVFSLSTAIIMHCYAEERDVFRSKYLNVLDWVFGVPPPPCETPRCNPQGKGTTNMPAPAEYSLPGKIALD* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1612 504 MobiDBLite consensus disorder prediction 1 38 - -
Amo03g1612 504 PANTHER UNCHARACTERIZED 28 474 IPR026749 -
Amo03g1612 504 Pfam N-terminal cysteine-rich region of Transmembrane protein 135 295 415 IPR031926 -
Amo03g1612 504 PANTHER BNAANNG02190D PROTEIN 28 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1612 Amo-Chr3 44131708 44138169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1612 - - adu:107479444 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2874 13 62956464 62963556 Amo03g1612 03 44131708 44138169 hybridization