Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1384 ATGGTAACAATTGCTGCAGCCAACGCCACCAAGAGAATAGAGACCTACGAGGAGTTCGCAAAAGTACACGCCATACTCCTCGCTGCTTCGGGCTTGCCGGAGTCCCTCCACCGCCGCCTCTTCCAGAAGCTCTCCGCCGAGTGCTTCGACGGCGGTAACTACTTCCAGATCGAGCCATGCGAGGAAGGCCGCCAGAGGCTCCTCGTCCTCACCGCGGAATCCATGGCAAAGCACTCCGACGTCTTCCTCGTCGACCATGCTTGGACCTTCAGACTCACCGATGCTTACAAGCAGCTGCATGAGGTTCCGGGATTGGCGGAGAGGATGGGGGCGTTGATGTGTGTGGATATTAATTTGAATGCAGAGGGAGAAGATGATGGAGCTTTGAGTGATACACGTGGCAGTGTTACGGAGGTTCTGGAGAGTGAGGTTCGAGAAGCAAAAGAGAAAAGTGATGGTAAGTTGAGGTGGTTGGAGCTTGAGGGGCTTGATATAAATGATGAGATGCTCTTGTCTCTCGAATTACCAACTAGATTTCCGGATTTAGTGGCCCTTAGCCTGCTTGGAAACAAGCTCAATAGAGTGGAAACAATTGTTCAGGAAGTTAGCAAGTTTAAACAACTTAAAGGACTCTGGCTGAACAATAACCCGGTTCTAGAAAAAGGTGATAGTGAACTTGTGGATGCACTTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAACTTTCACAAGCAATTTTGGGGAATGGGCCTTGGGGTTCTGTGCAGGGATATATGAAAAGGATAACCCAGGAAATGTTGATCAGGCTAGTACTCCGTTGCAGAGTGTGTCAACTCTTGATCTTTCAAATAGAAATATTCACAGTTTAATCAACAAGGCATTTACACCCAATTGTTTGCCATCTCTTTCATGCCTGAATATTCGTGGAAATCCATTGGAGCTAAACTCAATTGGTGGCTTATTAGATCTACTAAGGACATTCCCTTCATTGTGTTCTTTGGAGGTGGATATTCCTGGTCCACTTGGAGGAAGTGCCGTTGAAATCCTGGAATCACTTCCTAACATTTCCCAGCTAAATGGCATCAGTGCATCAAAAATATGGGAAACTGGAAAGCATGTTATAGATTCAGTGCTTCTTCCTCGTCTTCCGGAGTGGACTGCTGATGACCCTCTTGCTGATCGTATTGTAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCTAATGAAGAAAAATTAGATGAGACTTCTGTTTGGTATGTGATGGATGAACTGGGTTCGGCTTTGCGGCATAGTGATGAACCAAATTTCAGAGTGGCACCTTTTCTTTTCATGCCTGATGGTACTTTGGCATCAGCTGTGAGCTTTTCTATTCTGTGGCCAACACAGAACGTTATAAAAGGTGATGAATGCACTCGTGATTTTCTACTTGGTATTGGGGAGGATAGACAACGTTCTGCCAGACTTACTGCCTGGTTCCACACACCAGAGAACTATTTTGTCCAAGAGTATGAGAAGCACAATCAGAAATTGCAATCCAGAAAGTTAACATTACCCAAGGTGCAGTCTTCTGAGACTAGAAGCATTCGTCATCATGATGGTCGTGCTTTACGTGTCTACACAGATATACCGCACGTGGAGGAAAACTTGACACATCCTGATTTTGTAATCACAAAGGAACCAAAAGATGCAGATATAATATGGACAAGTGAGCAGGTAGATGAAGAGATGAAGAAAGCTACAGGAATAACAGATCATCAATACATCAACCAATTTCCATTTGAGGCATGTCTTGTAATGAAACATCATTTGGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGCTGCAGCCTACTTATAACCTTGAAACACATCTGTCTCAACTTATTGGTGACTATCACGTACGCAAAAGAAAAGGACTAGACAACCTTTGGATCTTAAAACCTTGGAACATGGCCCGAACTATTGATACAACTGTAACTGATAACTTACCTTCGATTATCCGGCTCATGGAAACAGGTCCAAAGATTTGCCAGAAGTATATTGAAGAACCTGCTTTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATCGTATTGGTCCGGAGCATGAATCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAATAATAAATATTCTCTGGACAGAAGTAGTTTTTTTGAGTATGAAACTCACTTCACCGTTATGAATTATCGTGGAAGAATAAATTTCAAGAATACTAAAGATTTTGCGAGGGAATTTGAGGAAGAGCATCAAGTTAAATGGTCAGATATACATACTCGAGTAAGAAACATGATTCTATCTGTATTCGAGTCGGCTGCTGTTGTACATCCAGAGATGCATAGTACAAAATCAAGGGCCATTTATGGTGTAGATGTCATGTTGGACAGATATTTCCAACCAAAGATACTTGAGGTGACATACTGTCCGGACTGTACTCGAGCATGCAAATACGACATGGAGATTGTGGTAGGAGACGGAGGTGTTGCCAAGGGGTGTGATTTTTTCAACAATGTGTTTAGGTGTCTCTTTTTGAATGAGATTTCACAGGTTAGCCCGTTGTATTACAAGCATAATTAG 2631 0.4306 MVTIAAANATKRIETYEEFAKVHAILLAASGLPESLHRRLFQKLSAECFDGGNYFQIEPCEEGRQRLLVLTAESMAKHSDVFLVDHAWTFRLTDAYKQLHEVPGLAERMGALMCVDINLNAEGEDDGALSDTRGSVTEVLESEVREAKEKSDGKLRWLELEGLDINDEMLLSLELPTRFPDLVALSLLGNKLNRVETIVQEVSKFKQLKGLWLNNNPVLEKGDSELVDALLKELPELEIYNSTFTSNFGEWALGFCAGIYEKDNPGNVDQASTPLQSVSTLDLSNRNIHSLINKAFTPNCLPSLSCLNIRGNPLELNSIGGLLDLLRTFPSLCSLEVDIPGPLGGSAVEILESLPNISQLNGISASKIWETGKHVIDSVLLPRLPEWTADDPLADRIVNAMWQYLMTYRLANEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPDGTLASAVSFSILWPTQNVIKGDECTRDFLLGIGEDRQRSARLTAWFHTPENYFVQEYEKHNQKLQSRKLTLPKVQSSETRSIRHHDGRALRVYTDIPHVEENLTHPDFVITKEPKDADIIWTSEQVDEEMKKATGITDHQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYHVRKRKGLDNLWILKPWNMARTIDTTVTDNLPSIIRLMETGPKICQKYIEEPALFQGKKFDLRYIVLVRSMNPLEIFLSDCFWVRIANNKYSLDRSSFFEYETHFTVMNYRGRINFKNTKDFAREFEEEHQVKWSDIHTRVRNMILSVFESAAVVHPEMHSTKSRAIYGVDVMLDRYFQPKILEVTYCPDCTRACKYDMEIVVGDGGVAKGCDFFNNVFRCLFLNEISQVSPLYYKHN* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1384 876 Gene3D Ribonuclease Inhibitor 258 367 IPR032675 -
Amo03g1384 876 SUPERFAMILY RNI-like 154 362 - -
Amo03g1384 876 Gene3D Ribonuclease Inhibitor 124 247 IPR032675 -
Amo03g1384 876 ProSiteProfiles TTL domain profile. 535 863 IPR004344 GO:0036211
Amo03g1384 876 Pfam Tubulin-tyrosine ligase family 589 839 IPR004344 GO:0036211
Amo03g1384 876 Gene3D - 664 843 - -
Amo03g1384 876 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 10 870 IPR027749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1384 Amo-Chr3 34016148 34024417 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1384 K16609 - gmx:100809212 1450.65