Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1227 ATGGCGATTTCCGATGTGCATGAGACTTCTGTCGCCGGCGACGGAGCCAACCACTCTTCGCTGCGGCAGAGGCACAGCCGCGTAGCTTCCAGCGGCGGCAACATGTTCGACGAAGCTGAGGCTTCCGCTGAGGCTGTGATGATAGATTCGTCGGGGTCCGACGATTCGCTGAACGAGAGGATAGGTGCCGCCAGGGAGGAGAAGGTGAAGGAGAGGCAGAAGCAGAAGGAGGAGGACCGGAAGCCGCCGGATCATGCTTCCCGAAATGAGGTCCAAGACGGCGAACGAGCTGCCGCCGGAGATAACTTCACTTACCGGGCTTCAGTTCCGGTTCACCGGAGAATCAAGGACAGCCCGCTCAGTTCCCGCAACATTTTCAAACAGAGCCATGCAGGACTGTTCAATCTCTGTGTAGTAGTGCTTATCGCGGTGAACAGCAGACTTATCATTGAGAATATAATGAAGTATGGTTGGTTGATAAATTCTGGCTTTTGGTTTAGTTCAAAATCGTTGAGAGATTGGCCCCTCTTAATGTGTTGTATTAGTCTTAATTTATTTCCACTTGCTGCTTTTATGGTGGAAAAGTTGGCACAGAAAAAGCGCATTAGTGAACCGGTCATTTTTCTACTTCATACAATCATTATGACAGGAGAAATTTTGTTCCCAGTTCTAGTAATTCTCAGCTGTGATTCTACGTTTTTATCAGGCCTCACATTGATGATGGTTGCATGCATTATATGGTTAAAATTGGTGTCATATGCACATACAAGTCATGATCTGAGATCACTTAGCTTGTCAATTGAAAAGGGAGAAACATTGCCCAATAATTTGAACATGGAGCACCCTTACAGAGTGAGCTTCAGGAGTATGGCATACTTCATGGTTGCTCCTACATTATGTTACCAGCCAAGCTATCCTCGCACACCTTCCGTCCGTAAGGGCTGGGTGTTTCGTCAACTTATCAAGTTGGTAATATTTACTGGACTTATGGGATTTATAATAGAACAATATATGCATCCTATTGTCCAAAATTCACAACATCCTTTTAAGGGAAACCTTCTATATGGCTTCGAGAGAACTCTAAAGCTTTCTGTTCCCAATGTATATGTGTGGCTTTGCATGTTCTATTGCTTCTTTCACCTTTGGTTAAATATACTTGCAGAACTTGTTCAGTTTGGTGATCGTGAGTTCTACAAGGATTGGTGGAATGCTAAAACTGTTGATGAGGTAGGTCTTTGTGCTTGCAGATTCATAGGTCGTTGTAATTAG 1269 0.4484 MAISDVHETSVAGDGANHSSLRQRHSRVASSGGNMFDEAEASAEAVMIDSSGSDDSLNERIGAAREEKVKERQKQKEEDRKPPDHASRNEVQDGERAAAGDNFTYRASVPVHRRIKDSPLSSRNIFKQSHAGLFNLCVVVLIAVNSRLIIENIMKYGWLINSGFWFSSKSLRDWPLLMCCISLNLFPLAAFMVEKLAQKKRISEPVIFLLHTIIMTGEILFPVLVILSCDSTFLSGLTLMMVACIIWLKLVSYAHTSHDLRSLSLSIEKGETLPNNLNMEHPYRVSFRSMAYFMVAPTLCYQPSYPRTPSVRKGWVFRQLIKLVIFTGLMGFIIEQYMHPIVQNSQHPFKGNLLYGFERTLKLSVPNVYVWLCMFYCFFHLWLNILAELVQFGDREFYKDWWNAKTVDEVGLCACRFIGRCN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1227 422 PANTHER STEROL O-ACYLTRANSFERASE 17 409 IPR014371 GO:0008374
Amo03g1227 422 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1C 17 409 - -
Amo03g1227 422 PIRSF Oat_ACAT_DAG_ARE 6 410 IPR014371 GO:0008374
Amo03g1227 422 MobiDBLite consensus disorder prediction 59 95 - -
Amo03g1227 422 MobiDBLite consensus disorder prediction 49 97 - -
Amo03g1227 422 MobiDBLite consensus disorder prediction 1 34 - -
Amo03g1227 422 MobiDBLite consensus disorder prediction 13 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1227 Amo-Chr3 28534610 28540198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1227 49 409 Lipid Metabolism Gene Families AT2G19450 63.989 6.84e-167 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1227 K11155 - gmx:732606 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2664 13 53286507 53289075 Amo03g1227 03 28534610 28540198 hybridization
Amo01g2741 01 98158231 98164347 Amo03g1227 03 28534610 28540198 PCT
Amo03g1227 03 28534610 28540198 Amo01g2741 01 98158231 98164347 PCT