Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1178 ATGGCAGACAAACCCCAACCGGTTCGGGTAGTGTACTGCCCCGTGTGCTCTATGCCACCCGAATACTGCGAATTCGGACCCGATTTCGAAAAATGCAAACCCTGGTTGATCCAAAACTTCCCTGACCTATATCCCGATCTTCTCAAAGAAACGAATGAAAGGGATGCTGATAAAGTTGCTGATAAGCTTCAAGTTACCGGTATATCTTCGGGGTCTAGTGATGGAGCTGCTACCTCAGCACCAAAGCAAGAAGAGGTCAAGCGTCTTCCTGGTGGGAAGATAAAGAAAAAGGAGAAGCAAGAGGTTGTTATTGAGAAAGTCATTCGTAACAAACGAAAATGTATCACGACTGTGAAAGGACTAGAACTTTTTGGTGTCAAGCTCAGTGATGCTTCAAAGAAACTTGGTAAAAAGTTTGCTACAGGAGCCTCTGTTGTAAAGGGTCCAACTGAGAAAGACCAAATTGATGTTCAAGGGGATATATCTTATGACATTGTGGAGTTCATTACAGATACATGGCCTGATGTCCCAGAAAGTGCAATTTACTTCATAGAGGATGGAAAGAAGGTTCCAGCTGCTTGA 582 0.4381 MADKPQPVRVVYCPVCSMPPEYCEFGPDFEKCKPWLIQNFPDLYPDLLKETNERDADKVADKLQVTGISSGSSDGAATSAPKQEEVKRLPGGKIKKKEKQEVVIEKVIRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDISYDIVEFITDTWPDVPESAIYFIEDGKKVPAA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1178 193 MobiDBLite consensus disorder prediction 66 87 - -
Amo03g1178 193 CDD DENR_C 100 185 IPR046447 -
Amo03g1178 193 SUPERFAMILY eIF1-like 19 184 IPR036877 GO:0003743|GO:0006413
Amo03g1178 193 TIGRFAM DRP1: density-regulated protein DRP1 7 183 IPR005873 GO:0003743
Amo03g1178 193 PANTHER TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22 1 193 - -
Amo03g1178 193 Pfam Translation initiation factor SUI1 99 172 IPR001950 GO:0003743|GO:0006413
Amo03g1178 193 ProSiteProfiles Translation initiation factor SUI1 family profile. 102 173 IPR001950 GO:0003743|GO:0006413
Amo03g1178 193 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 1 193 - -
Amo03g1178 193 Gene3D - 51 179 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1178 K24272 - gmx:100306708 336.65