Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0651 ATGAGGCGAAGAGGTGCGGATTTTCGAAGGCCAGTGAGGAGGAGGGTGCAGGATGTGGCGTGGTGGACACTCTGTAGCGTAGTAGCTCTCTTATTTATTTATATTCTTGTCACCACCACCAAAGGCTCCAACACTACTAGTACTACCTCAATGCCCCCTTTCTCCTTGAGAAACTTCAGGAATGAAAGGATCATGGAAAGCCTTAATATTACTGAAGAGATGTTAAGCCCTGACTCAGTAGCAAGACAACTAAATGATCAAATATCTCTAGCAAAAGCCTTTGTTGTAATTGCCAAAGAAAGTAACAATCTCCAATTAGCTTTGTCCTTAACTTCCCAGATTCAAAATTTGCAGATTCTCCTCTCAAATGCAGCCACCAGGCGCGCTCCCTTGACAATAATGGAGTCAGAGAAAGCGATTCATGATATGGCATCATTGCTGTATCAGGCACAGCAGCTCCATTATGACAGTGCAGGCATGATCATGAGACAGAAAGCAAAGATTGAATCTCTTGAAGAACAGATGAATTATGTAAATGAAAAGAGTTCGAAATACGGACAAGTAGCTGCTGAAGAAGTCCCCAAGAGCCTATACTGCCTAGGTGTCCAGTTGACATCAAAATGGTTAAATAATCTCGATTTGCAGAACAAATTGAAGGACAAATTGCAATCTGACATGAAACTTAGGGACAACAATCTTTACCACTTTTGTGTGTTCTCTGATAACATCCTTGCTACTTCAGTTGCAATCAACTCGACCGCGCAAAATTCTAAGAATCCAGATAGAATTGTTTTCCACATTGTCACGGACGAAATAAGTTATGCTGTTATGAAGGCATGGTTTGCTTTAAACGATTTTCGTGGTGTGACAGTTGAAGTTCAGAAGTATGAAGACTTCGATTGGTTAAATGCTTCATATGCTCCTGTGCTTAAGCAGCTCCAAGACTCAGAGATCCAGAGCTACTACTTTCGAGGAAGCAAAGACGATGGAAGTACTCCGATCAAGTTTCGGAACCCAAAATATCTCTCCATGCTTAACCACCTAAGATTCTACATCCCCGAAGTCTTTCCGGATCTAAAGAGGGTGGTGTTTCTCGACGATGATGTCGTGGTCCAAAAGGATCTTTCTAAGCTTTTCTCAATTGATTTGAATGAAAATGTTAATGGAGCAGTTGAGACATGTATGGAGACATTTCATAGGTACCATAAATACTTGAACTATTCACATCCTTTAATTAGAGCACACTTTGATCCTGATGCATGTGGTTGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGGAAAATGAATGTAACAGGAATCTACCACTACTGGCAAGAAAAGAATATAGATAGAACATTGTGGAAACTTGGAACATTGCCACCAGGGTTGTTAACATTTTATGGATTAACTGAGCCATTGGATCCATCATGGCATGTGTTGGGTTTTGGCTACACCTCTGTGGATCCTGTGTTGATAGAGAATGGTGCTGTGTTGCATTTCAATGGAAACTCCAAACCATGGTTGAAGATTGGGATGGAAAAGTACAAGCCCTTGTGGGAAAAATACATGGATTATTCTCATCCTTTGTTGCAACAGTGCAACTTTCACTGA 1620 0.4099 MRRRGADFRRPVRRRVQDVAWWTLCSVVALLFIYILVTTTKGSNTTSTTSMPPFSLRNFRNERIMESLNITEEMLSPDSVARQLNDQISLAKAFVVIAKESNNLQLALSLTSQIQNLQILLSNAATRRAPLTIMESEKAIHDMASLLYQAQQLHYDSAGMIMRQKAKIESLEEQMNYVNEKSSKYGQVAAEEVPKSLYCLGVQLTSKWLNNLDLQNKLKDKLQSDMKLRDNNLYHFCVFSDNILATSVAINSTAQNSKNPDRIVFHIVTDEISYAVMKAWFALNDFRGVTVEVQKYEDFDWLNASYAPVLKQLQDSEIQSYYFRGSKDDGSTPIKFRNPKYLSMLNHLRFYIPEVFPDLKRVVFLDDDVVVQKDLSKLFSIDLNENVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVQWRKMNVTGIYHYWQEKNIDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTSVDPVLIENGAVLHFNGNSKPWLKIGMEKYKPLWEKYMDYSHPLLQQCNFH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0651 539 Pfam Glycosyl transferase family 8 241 513 IPR002495 GO:0016757
Amo03g0651 539 CDD GT8_like_1 234 527 - -
Amo03g0651 539 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 539 IPR029993 GO:0047262
Amo03g0651 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 234 537 IPR029044 -
Amo03g0651 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 532 IPR029044 -
Amo03g0651 539 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 539 - -
Amo03g0651 539 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0651 Amo-Chr3 12019073 12021681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0651 1 539 Glycosyltransferase AT2G20810 73.801 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0651 K13648 - gmx:100792018 894.804