Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0644 ATGATGGCTTACAATAAAGGGTTGCATGGAAACATTGGAGGAGGAGGAGGAGGGAGTCACAGTCATAGTCATAGTCATAGTCATAGAGGGAGGCCATATGCATTGATGCTGCTCATTGCATTTGGGGCTGCACTTCTTGGTGTCATGCTCCTTCACAAGCTCAGGGAGAGGCGCATCTACACCCTCATTCTCAAAGACAAAGATCATCAACTTCTTTCCCTCAAGCTTCTCTTGCAGAAGGAAAGAGATCACACCAAAGAACTGAGTAATAAGAATGAAGAAATGAAGGGTAAACTATACGCTTTGAGGATTCAAAAGATGGAGGTTGATAGAAAGGTTGTGGAGATGCAATCCACCATGGATTCCCTGAGAGACGAGCAGAAAGTGATGGAATCGGCATTCGAGGAGAAGCAGAACGAGCTCAGAACAATGCAGGAGAAGGGGATCAATTTAGGAGGAGGGAACTCTCAAGTAACAGCACTGAGGGAGGATCTGAAGAAGAAGGAGGAAGAAATAGAGAACTTGAAAGGCCGTCTTGAGATCCCTGCTAAGACCCTCAATGATCCAGGCATCATTAGGAAAACTGTGATAGGAAATGGAACAGTAGAAGCACAGGATCAAATTGAGAAGGAAGAACATTCACTTGATACTACAAAAACTGGGGATGGTGATGTTAAAACTGAAGTAAAAGATGAAATTCAGAATAATGAGAGAGCAGGGGAAGGAACCGAGGGCCATGGAGATGATAATGGTGGCGGTGTCGCGACGAAAGATGTTGAAGCTGAAGTGGTGGATAGTGAAGTAAAGAAAGCAATCAGAGAAGAGAAGCCAGGACAAATTGAGAGCAATGCAAATGCTGGAGATGAGGAATCTAAGGTGAGGGAACTGGCAGACAGTGCCGGAACAAAGAAGAAACACGGACGTGTGAGTAGAATGAAGGGGAAACGGTGGAAAACAATCGTGAAGAACAAGTTAATGGAGAGAAATGGAATTTCTGCAAGTCATGCCGAAGTAAGCAAAGGCAACGAAAAAGCTAATGTAGAAGTGGAAGGTGAGTTGAAGGAAAATGCTGCAAGGGAGAAGAAGGAACAAGCCAATTTACTTAAGCCTGAAAATCATGAAATCAGCAAAGATGTTAGAAACATGATAGTGAATGATACAAATCATCAGGTGACAAACAACAACGGCACCGGCATCAACCCGGAACAAGAGGGAGTGGATGAAGAAAGACTGACAGAAAATAATGAAGACAGTGTTGCTCAACAAAACTGGAGCAGGAGGCATATCAACAAAGCTACCAAGGATGGTGCACAATCAAAATCCAAGGTGTTAGATGAAGAGCAAGAAGCAATAGAGATTTCAGATGTTCAAAACAGGGATGATGATGAGGAAGATAATGGTGAATTCTTCAGGGATTCCCTATCTGATGTTGAAGATGATAAGGAGGAGTACAAGGAAGAGATAAATGAGTCAGAGTTTCAGCCTGATTTGTGA 1494 0.4324 MMAYNKGLHGNIGGGGGGSHSHSHSHSHRGRPYALMLLIAFGAALLGVMLLHKLRERRIYTLILKDKDHQLLSLKLLLQKERDHTKELSNKNEEMKGKLYALRIQKMEVDRKVVEMQSTMDSLRDEQKVMESAFEEKQNELRTMQEKGINLGGGNSQVTALREDLKKKEEEIENLKGRLEIPAKTLNDPGIIRKTVIGNGTVEAQDQIEKEEHSLDTTKTGDGDVKTEVKDEIQNNERAGEGTEGHGDDNGGGVATKDVEAEVVDSEVKKAIREEKPGQIESNANAGDEESKVRELADSAGTKKKHGRVSRMKGKRWKTIVKNKLMERNGISASHAEVSKGNEKANVEVEGELKENAAREKKEQANLLKPENHEISKDVRNMIVNDTNHQVTNNNGTGINPEQEGVDEERLTENNEDSVAQQNWSRRHINKATKDGAQSKSKVLDEEQEAIEISDVQNRDDDEEDNGEFFRDSLSDVEDDKEEYKEEINESEFQPDL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0644 497 PANTHER OS08G0177500 PROTEIN 17 493 - -
Amo03g0644 497 Coils Coil 106 147 - -
Amo03g0644 497 Coils Coil 155 178 - -
Amo03g0644 497 Coils Coil 474 494 - -
Amo03g0644 497 MobiDBLite consensus disorder prediction 428 455 - -
Amo03g0644 497 MobiDBLite consensus disorder prediction 274 314 - -
Amo03g0644 497 PANTHER OS08G0177500 PROTEIN 17 493 - -
Amo03g0644 497 MobiDBLite consensus disorder prediction 388 497 - -
Amo03g0644 497 Coils Coil 74 98 - -
Amo03g0644 497 MobiDBLite consensus disorder prediction 287 305 - -
Amo03g0644 497 MobiDBLite consensus disorder prediction 235 255 - -
Amo03g0644 497 MobiDBLite consensus disorder prediction 209 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0644 Amo-Chr3 11967317 11969652 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0644 - - gmx:100791306 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1977 13 29983963 29986247 Amo03g0644 03 11967317 11969652 hybridization