Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0602 ATGTTTATTGATGAATTGGAGAAAGTATCTGCCAAAAAAAAGCTACCTCTGCCAGATATTTTTGAGCAAGTCACATTGGCAGGTGATTCCATGCTTCATGTGGCATCAGATATGGGGAAAGGACGCATTACAGAATTGATTTTACATCACTTCCCTAAGCTTCTTAACAAGAGAAACATCAGAGGCGATACTCCTCTTCATGTTGCTGCTAGATCTAACAAGAATCTTCGTCTAGTCAAAGTGATTCTCACCCAATACGCAAATGATAAGTCTAGATATGAGTTGGAGGATGAACTAACACGATTAACGAATGAATATGGCAACACTGCTTTGCACGAAGCGGTTTATAGCAAGGATCCTGCTGTTGTTACTGAACTTTTGAATGCAGATGAGGCTGTCATCAATCATTCAAACAAGTCAGGCAGATTGCCACTGCACTTGGCAATTGAGATTGGAAATGTAGAAATCTGTCGCCTTCTATTGAAAACTCCATTCCCAGCAAATAATTCTTTTCATCAATGCCATCTCCTTCACACCGTCATAATAAAAGGGAATCTTGCAAGCAGACCAGAGCTCATATCTTTAAGAGATGAAGATGGAGAGACTGCACTTCATCTTGCTGCCCATGTTGGTTTTGTTGAATGTGTTCAAATATTGTTGAAATCATCTGCTCTAACCGGTATGGAGCAAAACAAAAAAGGCAATCTTCCTATTCATCTTGCTTGTGAAAAGGGCCGTGTTGAGGTGGTCAAAGAATTGCTTCAACAAGAGTGGCCTAGCCCTAAAGTATGTCTTAATCAGAAAGGTCAAAACATTTTGCACATTGCAGCCAAGAATGGAAAAGCTAATTTGTTAAAGTACTTACTAAGAAACAAGAAGATTGAACCGTTCACTATAAATGAGAAAGACAAGAATGGAAATACCCCATTACATTTGGCTGCAAAAAATTTATTCCCTGAGGTTTTGTTCGTGATGACCGGAGATGAAAGAGTGAAGCTAAACTATGTCAACAATGACGGTCTAACTGCTCTTGATATTGTCTTGTTTCATCTCAGCCTAAGAGAAACACCAAGAGAGAAACTCTCATATTGGACATTAGGAAAATCTGGAGCTTCATGTTCAATGAGAGCATATAAATTGTATCGGTCACGTTCAGAATCACCCCAAATAGGCATGAAATATGACCAACAAACGGTCAACATATTTTTGATTGTGAGTACACTATTGGTTACAATTACATTTAGTGCAGCTTTTAGTGTTCCAGGTGGTGTTTATAGTTCTGATGACCCAAACCCACACAATAGAGGAATGGCAGTCCTGGCTGACAAAAAATTGTTCAAGGTGTTCACGATCTTCAACACCATAGCTATGTATTGCTCCGCAATTGGATCTATGATGTTTTTGTGGGAACGACTTGGGGATGACCGTCTTGCAGAGATGGCTATCAATTGCGCAACGCTTTTTATGTGTTTCGGTGTCACGTCGGTTGCTTTGGCATTTGCGTTTGCTGTATGTCTAACCGTCAGTAATGACTCCTTTCTTGCAATTGTTATAACTGTCCTTGCCATTTTCTTCATTTCCATTATCATCTCTATAGGTGTTGTAGCATGTTTCCCATATAGAGGTCGCAACCCTCTTGTGCGTCGAGTTAACAGATTCCTTATTTGGTTTAGCTGTAAATTTTGTCAATACACTGATAGACCTAAAAAGTTAGATGCACGGGAAAGGAACAAGGATGCAGAAAAGAACGAGTGA 1755 0.396 MFIDELEKVSAKKKLPLPDIFEQVTLAGDSMLHVASDMGKGRITELILHHFPKLLNKRNIRGDTPLHVAARSNKNLRLVKVILTQYANDKSRYELEDELTRLTNEYGNTALHEAVYSKDPAVVTELLNADEAVINHSNKSGRLPLHLAIEIGNVEICRLLLKTPFPANNSFHQCHLLHTVIIKGNLASRPELISLRDEDGETALHLAAHVGFVECVQILLKSSALTGMEQNKKGNLPIHLACEKGRVEVVKELLQQEWPSPKVCLNQKGQNILHIAAKNGKANLLKYLLRNKKIEPFTINEKDKNGNTPLHLAAKNLFPEVLFVMTGDERVKLNYVNNDGLTALDIVLFHLSLRETPREKLSYWTLGKSGASCSMRAYKLYRSRSESPQIGMKYDQQTVNIFLIVSTLLVTITFSAAFSVPGGVYSSDDPNPHNRGMAVLADKKLFKVFTIFNTIAMYCSAIGSMMFLWERLGDDRLAEMAINCATLFMCFGVTSVALAFAFAVCLTVSNDSFLAIVITVLAIFFISIIISIGVVACFPYRGRNPLVRRVNRFLIWFSCKFCQYTDRPKKLDARERNKDAEKNE* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0602 584 Pfam Ankyrin repeats (3 copies) 191 255 IPR002110 GO:0005515
Amo03g0602 584 Pfam Ankyrin repeats (many copies) 108 161 IPR002110 GO:0005515
Amo03g0602 584 ProSiteProfiles Ankyrin repeat region circular profile. 140 162 - -
Amo03g0602 584 Gene3D - 168 351 IPR036770 -
Amo03g0602 584 Gene3D - 1 167 IPR036770 -
Amo03g0602 584 ProSiteProfiles Ankyrin repeat region circular profile. 61 88 - -
Amo03g0602 584 ProSiteProfiles Ankyrin repeat profile. 233 255 IPR002110 GO:0005515
Amo03g0602 584 Pfam Ankyrin repeats (many copies) 264 313 IPR002110 GO:0005515
Amo03g0602 584 ProSiteProfiles Ankyrin repeat region circular profile. 233 255 - -
Amo03g0602 584 ProSiteProfiles Ankyrin repeat profile. 199 231 IPR002110 GO:0005515
Amo03g0602 584 ProSiteProfiles Ankyrin repeat profile. 140 162 IPR002110 GO:0005515
Amo03g0602 584 SUPERFAMILY Ankyrin repeat 13 256 IPR036770 -
Amo03g0602 584 ProSiteProfiles Ankyrin repeat region circular profile. 268 291 - -
Amo03g0602 584 SUPERFAMILY Ankyrin repeat 231 345 IPR036770 -
Amo03g0602 584 Pfam Ankyrin repeat 62 88 IPR002110 GO:0005515
Amo03g0602 584 ProSiteProfiles Ankyrin repeat region circular profile. 199 224 - -
Amo03g0602 584 ProSiteProfiles Ankyrin repeat profile. 61 94 IPR002110 GO:0005515
Amo03g0602 584 Pfam Domain of unknown function 396 506 IPR026961 -
Amo03g0602 584 ProSiteProfiles Ankyrin repeat profile. 268 291 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 61 92 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 268 301 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 305 335 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 233 263 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 199 232 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 106 136 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 27 57 IPR002110 GO:0005515
Amo03g0602 584 SMART ANK_2a 140 169 IPR002110 GO:0005515
Amo03g0602 584 PANTHER ANKYRIN REPEAT PROTEIN-LIKE 8 473 - -
Amo03g0602 584 PANTHER MOLTING PROTEIN MLT-4 8 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0602 Amo-Chr3 11076951 11088131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0602 61 521 Miscellaneous Gene Families AT2G31820 26.547 4.22e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0602 - - adu:107477925 1076.23