Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0583 TCTGGTTTATTTTATCCATTTTCGGTTTTGCATCGTTGGTTCTATTCATTTACATTGTCTTTTGTGGGTAGAAACGGTACACAGTTTGTGTTGGATGGAAAACCTTTCTACATCAATGGTTGGAACTCTTACTGGTTAATGGTGCAATCTGTGGATGATTATTCAAGGCCAAGGGTGCGTGAGATGCTGAGAGCTGGGGCCAAGATGGGACTCACTGTCTGCAGAACTTGGGCTTTCAATGATGGTGACTACAATGCCCTTCAAACTTCACCTGGTGTCTTCAATGAGCAAGCTTTCAAGGCTTTGGATTACGTTATAGCAGAAGCAAGGCGCCATGGAGTTAGGCTGCTCCTAAGCTTAGTGAATAACTTGCACGCATATGGTGGGAAGACTCAATATGTTGAATGGGCATGGCAAGAAGGGGTCGGACTAAGCTCATCTAATGATTCTTTTTTCTATGATCCATCAATTCGTAGTTATTTCAAGAATTACGTAAAGACTATTCTGACAAGGAAAAATACTATTACTGGAATCGAATATAGAAATGACCCCATCATTTTTGGTTGGGAGTTAATTAACGAACCTAGGTGCATGACGGATCCTTCTGGAGACACTCTCCAAGATTGGATAGAAGAAATGTCAGCTTTTGTCAAAGTGATCGACAAGAACCATCTTGTGACTGTTGGTCTTGAAGGCTTTTATGGTCCTAATGACCCGAAGCGTTTGACGGTCAACCCTGAGGCCTGGGCATCCAGACTTGGATCTGATTTTATTAGGAATTCCAAAACTGTGAATGTCGATTTCACCTCTGTTCATATATACCCTGACCACTGGTATGCATTGGATGACTTCTATCTATTACGGAGACAAGTTTTGAATAAGCCGGTCTTGTTCTCCGAATATGGATTATCAGACACAATCAAGAACTTCTCGCTCTCTAACCGAGAAAACATGTACAGAGTGATTTTAAACATTATCTACAAATCTGCTAAGAAAAAGAAGGTCAGGAGCCGGCGCCTAGTCTGGCAATTTCTTAGCCGGAGGAATGACCGAAGGTCGTCGACATATTCGCTTTTGTCGAACAAGCCTGCAGATTGGCCAAACTCAACTGGATGGATCAAGGACTATACAAAGCAATTTACAAAGAAATTTTGA 1155 0.4182 SGLFYPFSVLHRWFYSFTLSFVGRNGTQFVLDGKPFYINGWNSYWLMVQSVDDYSRPRVREMLRAGAKMGLTVCRTWAFNDGDYNALQTSPGVFNEQAFKALDYVIAEARRHGVRLLLSLVNNLHAYGGKTQYVEWAWQEGVGLSSSNDSFFYDPSIRSYFKNYVKTILTRKNTITGIEYRNDPIIFGWELINEPRCMTDPSGDTLQDWIEEMSAFVKVIDKNHLVTVGLEGFYGPNDPKRLTVNPEAWASRLGSDFIRNSKTVNVDFTSVHIYPDHWYALDDFYLLRRQVLNKPVLFSEYGLSDTIKNFSLSNRENMYRVILNIIYKSAKKKKVRSRRLVWQFLSRRNDRRSSTYSLLSNKPADWPNSTGWIKDYTKQFTKKF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0583 384 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 18 360 - -
Amo03g0583 384 Gene3D Glycosidases 19 380 - -
Amo03g0583 384 Pfam Cellulase (glycosyl hydrolase family 5) 33 315 IPR001547 GO:0004553|GO:0071704
Amo03g0583 384 SUPERFAMILY (Trans)glycosidases 20 346 IPR017853 -
Amo03g0583 384 PANTHER - 18 360 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0583 Amo-Chr3 10639646 10642800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0583 19 345 Glycoside Hydrolase AT2G20680 68.622 1.07e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0583 K19355 - gmx:100811461 561.607