Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0388 ATGACGATGATGACTACTACTTCGTTTATCCAATTTCACCAAATAATAATTCTTTTCTTTCTCATTCTCACTTTATGGAACTCTCAAGTAACAATGTCACGCAGGCTATTTGAGTCTACATGCACAAGAGAGAGACATGAGAAATGGATGGAAGAATATGGAAAAGTGTATAAGGATGGTGAAGAGAAAGAAAGAAGGTTCCGAATATTCAAGAACAATGTTGAGTTCATTGAGTCCTTCAATGCGGCTGGGGACAAAAGTTTCAAGCTTAGTGTTAACAGATTTGCGGACCTAAGCGTTGAAGAGTTCAAGGCTTCTCTTAATGGCCTTCCCAAGAGTCATTGGCAAACGACGCCGTTCCGGCATGAGAATGTAACTGACATTCCAGAAACCGTGGACTGGAGGAAAAGAGGAGTTGTTACACCAATCAAGGACCAAGGCACATGTGGTAGTTGGTGGGCATTTTCATCTGTAGCTGCAGTTGAAGGAATCCACAAAATAAGTACAGGTAAACTAGTGTCTCTCTCAGTGCAAGAACTAGTAGATTGCGTAAGAGGCGACAGTGAAGGATGCTATGGTGTGAATCAGACTACCCATAACAAACAAGTTGATAAGCCATGTAAGGCTAATGAGAAGGAAACAATACATAATGTAGCTAAGATTAAAGGGTTCGAGAAGGTTCCTTCTAATAACGAAAAGGCACTCCTCAAAGCTGTGGCAAAACAACCAGTGTCGGTTTATCTTCAAGCTAGTGGGTATTATTTTCAATTTTATTCTAGTGGGATTTTCACTGGAATATGTGAAACTGAGCCAGACCATACTGCTACGGTAGTTGGTTATGGTAAAGATAAGGATGGTACCAAGTATTGGATAGTAAAAAATTCATGGGGTACTGACTGGGGAGAAAAAGGGTACATAAGGATGAAGAGAGAGGTACATGCTAAGGAAGGGTTATGTGGAATTGCCAATAATGCCACTGCAACCGTCGCTGATGGGGTGTACATAGACATGCTTTGTGTAACCTTCTGTACTGTTTTAAGTCAGATATATTTGTTCTAA 1059 0.406 MTMMTTTSFIQFHQIIILFFLILTLWNSQVTMSRRLFESTCTRERHEKWMEEYGKVYKDGEEKERRFRIFKNNVEFIESFNAAGDKSFKLSVNRFADLSVEEFKASLNGLPKSHWQTTPFRHENVTDIPETVDWRKRGVVTPIKDQGTCGSWWAFSSVAAVEGIHKISTGKLVSLSVQELVDCVRGDSEGCYGVNQTTHNKQVDKPCKANEKETIHNVAKIKGFEKVPSNNEKALLKAVAKQPVSVYLQASGYYFQFYSSGIFTGICETEPDHTATVVGYGKDKDGTKYWIVKNSWGTDWGEKGYIRMKREVHAKEGLCGIANNATATVADGVYIDMLCVTFCTVLSQIYLF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0388 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 289 308 IPR025661 -
Amo03g0388 352 Gene3D Cysteine proteinases 25 330 - -
Amo03g0388 352 CDD Peptidase_C1A 129 326 IPR039417 -
Amo03g0388 352 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Amo03g0388 352 PRINTS Papain cysteine protease (C1) family signature 273 283 IPR000668 GO:0006508|GO:0008234
Amo03g0388 352 PRINTS Papain cysteine protease (C1) family signature 289 295 IPR000668 GO:0006508|GO:0008234
Amo03g0388 352 Pfam Cathepsin propeptide inhibitor domain (I29) 46 103 IPR013201 -
Amo03g0388 352 SMART pept_c1 128 329 IPR000668 GO:0006508|GO:0008234
Amo03g0388 352 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 34 326 - -
Amo03g0388 352 SMART Inhibitor_I29_2 46 103 IPR013201 -
Amo03g0388 352 Pfam Papain family cysteine protease 128 196 IPR000668 GO:0006508|GO:0008234
Amo03g0388 352 Pfam Papain family cysteine protease 202 327 IPR000668 GO:0006508|GO:0008234
Amo03g0388 352 SUPERFAMILY Cysteine proteinases 42 327 IPR038765 -
Amo03g0388 352 PANTHER SENESCENCE-ASSOCIATED GENE 12 34 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0388 Amo-Chr3 7200433 7203598 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0388 - - gmx:100817009 404.831