Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0354 ATGTCAGCATCATCACCATCACCACCACCATACGATCTCCAGTCCTTCAAGTTCGAGCCAATCAGGGAGTCGATCGTGTCACGGGAGATGACCCGTAGGTACATGACAGACATGGTGACGCACGCCGACACCGACGTTGTGATCGTGGGTGCCGGTTCTGCCGGGCTGTCGTGCGCCTACGAGCTCAGCAAGAACCCGTCAGTCAACATCGCCATCATTGAACAGTCTGTCAGTCCCGGTGGTGGCGCTTGGCTCGGTGGCCAACTTTTCTCTGCCATGGTAGTGCGTAAGCCGGCACATCTGTTCCTAGACGAGCTCGGCATTGAGTACGACGAGCAAGAGAACTACGTGGTGATCAAGCATGCAGCGTTGTTCACTTCAACCATCATGAGCAAGCTCCTCGCCCGCCCCAACGTGAAGCTATTCAACGCTGTGGCYGCCGAGGACTTGATAGTAAAGAACAACAGGGTTGGTGGTGTTGTGACAAACTGGGCCTTGGTGTCAATGAACCATGACACACAGTCATGCATGGACCCAAATGTYATGGAGGCTAAGGTTGTGGTTAGTTCATGTGGGCATGATGGGCCGTTTGGGGCCACAGGGGTTAAGAGACTCAAGAGCATTGGGATGATTGATAGTGTTCCTGGGATGAAGGCACTTGATATGAATGCTGCTGAGGATGCTATTGTCAAACTCACTCGGGAGATTGTTCCTGGAATGATTGTTACTGGCATGGAAGTTGCTGAGATTGATGCTGCTCCTAGAATGGGTCCAACATTTGGGGCAATGATGATATCTGGGCAGAAGGCAGCACATCTGGCTTTGAGAGCACTGGGACTCCCAAATGCTATGGACTACGCTGCAAACATCCCCCACCTTGAGCTTGTCCTTGCTGCTGCACAATCTCCTCATGTTGTTGATGCTTAA 927 0.521 MSASSPSPPPYDLQSFKFEPIRESIVSREMTRRYMTDMVTHADTDVVIVGAGSAGLSCAYELSKNPSVNIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGIEYDEQENYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNNRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNAAEDAIVKLTREIVPGMIVTGMEVAEIDAAPRMGPTFGAMMISGQKAAHLALRALGLPNAMDYAANIPHLELVLAAAQSPHVVDA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0354 308 Pfam Thi4 family 27 260 - -
Amo03g0354 308 SUPERFAMILY FAD/NAD(P)-binding domain 7 271 IPR036188 -
Amo03g0354 308 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 1 308 - -
Amo03g0354 308 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 1 287 IPR027495 GO:0009228
Amo03g0354 308 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 23 277 IPR002922 -
Amo03g0354 308 Gene3D - 12 42 - -
Amo03g0354 308 Gene3D - 43 278 IPR036188 -
Amo03g0354 308 PRINTS Adrenodoxin reductase family signature 69 82 - -
Amo03g0354 308 PRINTS Adrenodoxin reductase family signature 45 67 - -
Amo03g0354 308 PRINTS Adrenodoxin reductase family signature 213 226 - -
Amo03g0354 308 PANTHER THIAMINE THIAZOLE SYNTHASE 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0354 Amo-Chr3 6582830 6586437 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0354 K03146 - gmx:547462 553.903