Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0012 ATGACTTTATGTCTTCCCTTTTTCTTCTTCCCACTTCTTCGTCTCTTTCGGTTTCACTGTGAGTATCAGTCACCACACATGGACCACGAATTCTCCATGGACGATCTATCTCAGCTCGTCGAAGCAGCCAACGATTTTGCTACCTACCCTGGGGTGCAAAGCGATGATTCCGCTAGAGACTTTCTCAACCGTTTCCCTCTTCCTCTCATAATCAATGCGTTACAGACCCAATATGATGTGCCTGGCCTAGAGAATACTCTAGTTGCATGCCTTGAGAGGTTGTTCAAAACCAAGTTGGGTGCTTCTTTGATTCCACAGTATATGTCATTTGTTCAAGTTGGTCTACAAGCAGATTCTCAACCAGTCCGATCCTTAGCCTGCAAAACAGTCACTTGCCTTATAGAGAATCCTGGCAGTGATTGCAAGACTCTTGCTCGTTTAATTACAGACTTCAACATATATCCTCTGTTGATTGATTGCCTTATCAATGGCAATGAGCAAGTGGCAGCTGCTGCAATGGAAGCAATGAAAATGTTAGCAGGTTTTCCTGAAGGCATGGAAATTATTTTTCCATCTGCCAAAGGAGTTGACTCAGACCTCGGGGCTATATCGTCACGGTGTTCATCACTGGGTCGAGTTCGGATAATGGCTTTAGTGGTGAAACTATTTTCTGTATCTAGGTCTGCTGCATCTACCATTTACAGTTTGAATCTACTTAAATTGTTGGAAGCAGAAATAAAAAATGCAAATGATACCCTCGTAACTTTAAGTGTTTTGGAGCTTCTGTATGAGTTAGCAGAGATTGAGCATGGCACAGAATTTCTGTCAAAGACTAGCATCCTTCAATTACTTTGTTCTATAATTAGTGACAATTCTGCGGAATCTATTTTAAGATCGCGAGCAATGATGATAACTGGAAGACTTTTGTCTAAGGAAATTATATACTCCTTCATAGATGAATCTTGTGCTAAAACTGTTATTTCATCTATTGATGGTAAACTTCAGTCCTTGGAAACATCTGCTAGGGATGAATGCGAAACTGCACTTGAAGCATTTGGTCAAATAGGATCAACTTTTGAAGGAGCTAGACTACTACTCTCGGGTTCACAACCTCCAGCTAGACATGTTACTTGTGCTGCTTTTGATCGACAAGGACCACAAGGGCATGGTAGACAACTGGCTGCATTGCATGCTCTAGGAAACATATCTGGAGAGACACGGTCTGAGAACATTATACTCAATGCTGAAGCTGAAGAAAACCTACGACGCATGGTCTATGAGGCTGCATCCAAGAGCTCAAAGCTGACTCCATCGGGTCTATTTCTGTCTGTTTTGCATCAGGATTCAGAAATACGCTTAGCGGCCTATAGAATGATTAGTGGATTAGTTGCCCGACCATGGTGCTTGATGGAGATATGCTCGAAACAAGAGATCATAAATATAGTGACCGATCCAAGTACCGAAACCAAAAAAATAGGCATGGAAGCCAGATATAACTGTTGTAAGGCAATACACAAATCATTGATGTCTAGCAGAGTTTCCAGTGATTCTGCTTTTGCGGGTATAGCTACAAAGTTGCAGGAAGCCGTGGAAAAGGGTCCTTATCTGATTAAGAAGCAGGTCGAAGCTCAACCTGTAGTGATGACGGCTGAGAGATTTTAG 1662 0.4218 MTLCLPFFFFPLLRLFRFHCEYQSPHMDHEFSMDDLSQLVEAANDFATYPGVQSDDSARDFLNRFPLPLIINALQTQYDVPGLENTLVACLERLFKTKLGASLIPQYMSFVQVGLQADSQPVRSLACKTVTCLIENPGSDCKTLARLITDFNIYPLLIDCLINGNEQVAAAAMEAMKMLAGFPEGMEIIFPSAKGVDSDLGAISSRCSSLGRVRIMALVVKLFSVSRSAASTIYSLNLLKLLEAEIKNANDTLVTLSVLELLYELAEIEHGTEFLSKTSILQLLCSIISDNSAESILRSRAMMITGRLLSKEIIYSFIDESCAKTVISSIDGKLQSLETSARDECETALEAFGQIGSTFEGARLLLSGSQPPARHVTCAAFDRQGPQGHGRQLAALHALGNISGETRSENIILNAEAEENLRRMVYEAASKSSKLTPSGLFLSVLHQDSEIRLAAYRMISGLVARPWCLMEICSKQEIINIVTDPSTETKKIGMEARYNCCKAIHKSLMSSRVSSDSAFAGIATKLQEAVEKGPYLIKKQVEAQPVVMTAERF* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0012 553 Coils Coil 239 259 - -
Amo03g0012 553 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 27 553 IPR019538 GO:0043248
Amo03g0012 553 Gene3D - 32 531 IPR011989 -
Amo03g0012 553 SUPERFAMILY ARM repeat 115 510 IPR016024 -
Amo03g0012 553 Pfam Proteasome non-ATPase 26S subunit 90 542 IPR019538 GO:0043248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0012 K06692 - gmx:100785671 797.734