Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2718 ATGGCTTTAGGAGGAACAGCTCCCCCAAGAGGAAGTGCAGCAGCAGCTGCTAGCTTGAGGAGAAGGAGAACAACCAGCGGTGGCGTCTCCGGAGGAGCAGCTGGAACCATGCTTCAATTCTACACGGATGATGCCCCGGGCCTCAAGATCTCTCCAAATGTGGTTCTTGTAATGAGCATTGGCTTCATTGCATTTGTTGCCGTCCTTCATGTGATGGGCAAGCTTTACTTTGTGCGTAGGGAGGCATAA 249 0.5221 MALGGTAPPRGSAAAAASLRRRRTTSGGVSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2718 82 Pfam Sec61beta family 34 73 IPR016482 -
Amo02g2718 82 MobiDBLite consensus disorder prediction 1 33 - -
Amo02g2718 82 PANTHER SEC61 SUBUNIT BETA 1 81 IPR030671 GO:0005784|GO:0006886
Amo02g2718 82 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2718 Amo-Chr2 84211829 84213264 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2718 K09481 - twl:119984557 109.768