Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2704 ATGAGTTCCGGCGAGCTTCTCCACATACACCCCCAGGAGCTGCAGTTCCCCTTTGAATTGAGGAAGCAGATCTCTTGCTCTTTGCAGCTCTCTAACAAYACAGATAACTATGTGGCTTTCAAGGTTAAGACAACAAACCCAAAGAAGTACTGTGTAAGACCTAACACTGGAATTGTGTTGCCAAGGACTACGTGTGATATTATAGGTTTCTTTCTAACCTCTCTCTCTCAAGCAATCTTTTGTTAG 246 0.4309 MSSGELLHIHPQELQFPFELRKQISCSLQLSNNTDNYVAFKVKTTNPKKYCVRPNTGIVLPRTTCDIIGFFLTSLSQAIFC* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2704 81 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 81 IPR000535 -
Amo02g2704 81 SUPERFAMILY PapD-like 2 68 IPR008962 -
Amo02g2704 81 Pfam MSP (Major sperm protein) domain 7 67 IPR000535 -
Amo02g2704 81 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 68 IPR016763 GO:0005789
Amo02g2704 81 Gene3D Immunoglobulins 2 77 IPR013783 -
Amo02g2704 81 PANTHER VESICLE-ASSOCIATED PROTEIN 1-1-LIKE 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2704 Amo-Chr2 83953940 83954481 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2704 - - gmx:100779655 135.576