Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2702 ATGTCAAGACGCGATGTACCTGATTCTGATCCAGATGACGATGWCTCAGCTTCAAGCTCCGGCGAGGAAGAGGAAGAGGCGGAAGAAACCACCGTTGCCGKGACCGCAAAGACGGTTTCGGAGTACGAGAAGCAGAGGCTATCGAGAATAGCGGAGAATAACGCAAAGCTGGAGGCACTAGGTCTGCATAAAATGGCGTCTTCCTTGTTGAACAGAAAAGGGAAAGAGAAGCTCAAAGAAGAAGAAGAAGAATTAGATGATCATGATGATGATGATGATGAGTATATCCCCGACGATGATGCAGAAGAACCAGTATCAGATTCTTCGGACGATAAAGATGAAGAATTTGTGATCGGAAATGCTTCTGGATCGCGCAAAAGGAAGGTGAAGGACAAAGGTTTAAAAATGAAAGCTAAAGTGTCTGGGAAGAAGCATTGTAATAGGAATTCAGAGTACYTTGATGGTGATGATGAAGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCCCTGCAAGACAGTGGTGTAGAAGATTCCTCTTTCAAACATGTAGTGAAGAACATTACTAAGTCTGAGAAAAAGAGGAATATTCAAAATCAAGAGGATAAAGAAAGAAAGAAGAACAAGAAATCGTTTGCTAGTAGACTGCAAATGACTGAAGATGAACTCATTGTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACTGTATCAATGAGAGATCTACAAAGAGCYGCCATAGCTCATGATTTCTCTTGGACTGACAAAGAATTGGTCGATATGATTCGTTGCTTTGATAGTGATGGAGATGGAAGGATAAWCCTTGACGATTTCCGGAAGATTGCTGTTCGATGCAACTTGATTAGAGAGSCTTAA 876 0.4178 MSRRDVPDSDPDDDXSASSSGEEEEEAEETTVAXTAKTVSEYEKQRLSRIAENNAKLEALGLHKMASSLLNRKGKEKLKEEEEELDDHDDDDDEYIPDDDAEEPVSDSSDDKDEEFVIGNASGSRKRKVKDKGLKMKAKVSGKKHCNRNSEYXDGDDEDEALRQAIALSLQDSGVEDSSFKHVVKNITKSEKKRNIQNQEDKERKKNKKSFASRLQMTEDELIVHFFQLDEAGKGTVSMRDLQRAAIAHDFSWTDKELVDMIRCFDSDGDGRIXLDDFRKIAVRCNLIREX* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2702 291 MobiDBLite consensus disorder prediction 1 158 - -
Amo02g2702 291 SUPERFAMILY EF-hand 211 286 IPR011992 -
Amo02g2702 291 Gene3D - 149 207 - -
Amo02g2702 291 MobiDBLite consensus disorder prediction 111 127 - -
Amo02g2702 291 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 157 174 IPR003903 -
Amo02g2702 291 SMART efh_1 257 285 IPR002048 GO:0005509
Amo02g2702 291 Coils Coil 71 91 - -
Amo02g2702 291 Pfam EF-hand domain pair 221 281 IPR002048 GO:0005509
Amo02g2702 291 MobiDBLite consensus disorder prediction 15 29 - -
Amo02g2702 291 MobiDBLite consensus disorder prediction 128 143 - -
Amo02g2702 291 Coils Coil 189 209 - -
Amo02g2702 291 Gene3D - 213 286 - -
Amo02g2702 291 MobiDBLite consensus disorder prediction 83 110 - -
Amo02g2702 291 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2702 35 289 EF-hand Containing Proteins AT1G73440 39.608 1.75e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2702 - - var:108347013 296.589