Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2685 ATGAGGGATCAGAATCTTGAGCTGCAGGAATCGGGTTGGGAGGAGCTTCGAAAGGAAGCTCGCAAGATCGAAGGCGATCTCGACGTCAAGCTCTCTTCCTACGCCAAACTCGGCACAAGGTTCACCCAAGGACAATCACCAGGTTACGTGGATGGAAGCTCACCATCTCTTGGGTCCAGTAGGTCCTGGAAGTCCATGGAAATGGAAATCCAATCCTTGCTCGAGAAACTATTGGACATAAATGATTCAATGAGCAGATGTGCTGCATCTGCTGGGCCAGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGATATTCTTCATGAGTTCACACAGGAATTCAGACGTATCAAGGGGAACATAAACTCAATGAGGGAACATGCTGAACTTTTGAGTTCTGTCAGGGATGATATTACTGATATTAAGACATCGGGTAGTATGTCACCAAGGAATCAATTATTACGGGAGAGAGCTGCCATCCATGGAAGTATATCTCATATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCAGTCTTAGGTTCTCAAAGAGCATTGTTCGGTGATGTTCAAGGAAAAGTGAAACTTCTCGGTGACAAGTTCCCCGTTATTCGTACCCTACTTGTTTCAATTAGAAGGAAGCGCTCAAGGGATACCCTTATTCTGTCGGCAGTAATTGCAGCTTGTACGTTGTTCATCATCATCTACTGGCTTTCAAAGTAA 729 0.4472 MRDQNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGTRFTQGQSPGYVDGSSPSLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRDDITDIKTSGSMSPRNQLLRERAAIHGSISHIDDVISQAQATRAVLGSQRALFGDVQGKVKLLGDKFPVIRTLLVSIRRKRSRDTLILSAVIAACTLFIIIYWLSK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2685 242 PIRSF Golgi_SNARE 6 241 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Amo02g2685 242 PANTHER GOS-28 SNARE- RELATED 4 242 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Amo02g2685 242 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 242 - -
Amo02g2685 242 Pfam Snare region anchored in the vesicle membrane C-terminus 153 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2685 Amo-Chr2 83573207 83578578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2685 K08495 - gmx:100781813 427.943