Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2494 ATGAAAGCCCTCATAAGCAGTTCTTGTTCCAAGGCCATAGTTGGGAGCCTTGGATCAAATATTTATCATAGGAGAGGTGGTGGTGGTGTTGTTGCTGCTCATGTTCCTGGGAGAGTTGAGTTCTGCTTCTCACTGAGATCAAGAAATGACAAAAGGGGCTGCAGCTTTTGGTTCCTTAAGAAAAAGGGTGTAACCCCAATTCTTTCAGTGCCACCAAAAACTGAGGTGGAATTGGAACCATCAGAGCCAGATTTGGAAACTGTAGAGCCTCAAGCTCAAAAAAGTGAACAAACAAATGAATCAAAGTTTGTACACGTAACATTTCAGTTGCAAAAGAATTGCTTCTTTGGCGAACAGTTTCTAATAGTTGGAGAAGATCCTATGCTTGGTTCTTGGGACCCTTTAGAGGGATTACCAATGGCCTGGTCTGATGGGCATGTATGGACTGCTAATCTGGATATTCCTGCTGGAAAGTCAATTCAGTACAAGTTTATACTGAAAAAAAAAGCAGGGAAGATTGTGTGGCAACCGGGCATGAATCGAATCCTCAACATTTCAGAAAATATGAATAGAATAATTGTTAGTGAGGATTGGGAGAAGGCTGAACTTCAGGAAATAATAGAGGAAGATCAAATTGCTCAATCAAATGAGGAACTTCAAGTTGTCTCAGAAACATCTACTTTAGCTGAAGATTCAGATATTCCTAAAGAGGAACTTGTTTCCGGCTTGTCTGAAGCATCAGACCTTGAAGCTAACCAAAGCCAAACTCATGATGCAGAGAATCCAATTACTGAAGAACCTGAGGTGCAGAGACCCAGCAGTGATAGTATTTCTTACTCAACGGAGATGCCATTGGCTATTGTTGCGGAAAACATTGGTTCTTTTGAGGATTCCAGCAACAATACAAGCTATGAGAATAATTTAAGCAATATTCAACTGAACGAGAGTTTGAGTTGTCCTTGA 963 0.4081 MKALISSSCSKAIVGSLGSNIYHRRGGGGVVAAHVPGRVEFCFSLRSRNDKRGCSFWFLKKKGVTPILSVPPKTEVELEPSEPDLETVEPQAQKSEQTNESKFVHVTFQLQKNCFFGEQFLIVGEDPMLGSWDPLEGLPMAWSDGHVWTANLDIPAGKSIQYKFILKKKAGKIVWQPGMNRILNISENMNRIIVSEDWEKAELQEIIEEDQIAQSNEELQVVSETSTLAEDSDIPKEELVSGLSEASDLEANQSQTHDAENPITEEPEVQRPSSDSISYSTEMPLAIVAENIGSFEDSSNNTSYENNLSNIQLNESLSCP* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2494 320 PANTHER ALPHA-AMYLASE 1 271 - -
Amo02g2494 320 SMART CBM_20_2 103 195 IPR002044 GO:2001070
Amo02g2494 320 MobiDBLite consensus disorder prediction 249 278 - -
Amo02g2494 320 MobiDBLite consensus disorder prediction 295 320 - -
Amo02g2494 320 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 98 200 IPR002044 GO:2001070
Amo02g2494 320 PANTHER OS01G0856900 PROTEIN 1 271 - -
Amo02g2494 320 CDD CBM20 106 198 - -
Amo02g2494 320 Gene3D Immunoglobulins 101 199 IPR013783 -
Amo02g2494 320 SUPERFAMILY Starch-binding domain-like 101 194 IPR013784 GO:0030246
Amo02g2494 320 MobiDBLite consensus disorder prediction 75 97 - -
Amo02g2494 320 Pfam Starch binding domain 104 190 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2494 Amo-Chr2 78609533 78611953 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2494 - - ahf:112750109 624.009