Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2456 ATGAACACTACTTCCACTTCTCTCTCTATAAATCCCTCTCTCTCTCCTCCTTTTCTCTCACCTGACACAAACACCACTCATTCTTCTTCTTTCTCTTTTCCCTCTTCCTCTTCTTCATACTACCCTCGTTTTCCTTCTGCTGGATTCTCTCTCCTCCAATCATTTGGACAAAAACCCATCACACCCATTTGCAAAAGATCGAAGTTTTGCACCTTTCAAGGCTCAAACACTCTGAGAAGAAGGAAAAGTTCGTACCTTGGAGCTACCAACGAAAAAATGACCATAGCTGGGGATAGTTTGCTTCAGGTTGTTGAGGAAGAAGAAGATTCTCCTCCTGAGTCTGCTTTGCTTGATCCTGAGAACAATTCTAGGCCAAGAAGAATCGCACTTTTCGTTGAGCCTTCTCCATTTGCGTATGTTTCAGGATATAAAAACCGGTTTCAGAATTTTATAAAATACCTTCGTGAAATGGGAGATGAGGTAATGGTTGTGACAACACATGAAGGTGTACCCAAGGAATTTTATGGAGCAAAATTAATTGGATCGCGAAGCTTCCCTTGTCCTTGGTATCAGAAGGTACCCCTCTCTTTGGCACTTAGTCCAAGAATAATATCAGCTGTTGCCGAGTTTAAGCCTGACATAATACACGCATCGTCACCAGGAATAATGGTGTTCGGTGCTCTTGCAATTGCAAAGCTTCTTAGTGTTCCCATTGTCATGTCTTATCACACCCATGTACCAGTATACATTCCAAGATACACCTTTAGCTGGCTGGTGCAACCCATGTGGTGGGTCATAAAGTTTCTGCACAGAGCTGCAGACCTGACTTTGGTGCCGTCAGCTGCCATTGCAAGGGATCTTGAAGTAGCTAGAGTAACAGCAGCTAACAAGATTCGCCTTTGGAACAAGGGTGTCGATTCTGAAAGTTTCCATCCCAAATTCAAGTCCCATGAAATGCGAATAAGACTGAGCAATGGCGAGCCTGAGAAGCCCTTGATAGTTCACGTAGGACGGCTTGGAGTCGAGAAAAGTCTAGATTTCCTCAAAAGTGTCATGGATAGGCTTCCTGAAGCAAGAATTGCTTTTATAGGAGATGGACCATACAGAGAGGAGCTGGAGAAAATGTTTCAAGGCATGCCTGCAGTATTCACAGGAATGTTAGGAGGGGAAGAACTGTCTCAAGCTTACGCCAGTGGAGACGTCTTTGTGATGCCTTCGGAATCCGAGACACTCGGCCTGGTTGTCTTAGAGGCCATGTCTTCAGGGATTCCGGTCGTGGGAGCACGTGCCGGTGGTGTCCCAGACATAATCCCTGAAGACCAAGATGGCAAGATTGGCTATCTCTACACTCCGGGCGATCTAGAAGACTGTTTGAGCAAAGTAAAACCTCTCTTGTACGACCACGAGTTGAGGAAAACCATGGGACAAGCTGCTCGTCTGGAGATGGAGAAGTACGATTGGAGAGCAGCCACAAAGAAGATTCGCAACGAAAACTACAACGCGGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTTTTAAGACCCTTCCAATGGCTCACGAAACGGATTTTCCCATCTCCAGAGGTCAATGTATAG 1599 0.4565 MNTTSTSLSINPSLSPPFLSPDTNTTHSSSFSFPSSSSSYYPRFPSAGFSLLQSFGQKPITPICKRSKFCTFQGSNTLRRRKSSYLGATNEKMTIAGDSLLQVVEEEEDSPPESALLDPENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALAIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIARDLEVARVTAANKIRLWNKGVDSESFHPKFKSHEMRIRLSNGEPEKPLIVHVGRLGVEKSLDFLKSVMDRLPEARIAFIGDGPYREELEKMFQGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKVKPLLYDHELRKTMGQAARLEMEKYDWRAATKKIRNENYNAAIWFWRKKRAQLLRPFQWLTKRIFPSPEVNV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2456 532 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 495 - -
Amo02g2456 532 CDD GT4-like 127 497 - -
Amo02g2456 532 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 34 531 - -
Amo02g2456 532 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 34 531 - -
Amo02g2456 532 Gene3D Glycogen Phosphorylase B; 332 490 - -
Amo02g2456 532 MobiDBLite consensus disorder prediction 1 27 - -
Amo02g2456 532 Pfam Glycosyl transferases group 1 328 480 IPR001296 GO:0016757
Amo02g2456 532 Gene3D Glycogen Phosphorylase B; 127 327 - -
Amo02g2456 532 Pfam Glycosyltransferase Family 4 145 308 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2456 Amo-Chr2 77967463 77972135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2456 54 448 Glycosyltransferase AT5G01220 74.811 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2456 K06119 - gmx:100780899 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2229 12 101841197 101846328 Amo02g2456 02 77967463 77972135 hybridization