Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo02g0598 | ATGGGGGTAAGCTCACAAACTCTAGAGATTACGGTTATTTCCGGTGAAAACGTTCATGTGAAGGAGGAATCATACGTCGTCGTTCGAGCTGAGTCACTCAAATCTTGCACAACAAAAGCAGCCAAAAACACTGACATTATTATCAACAATAATCATTGCTCAAGTTTGATTTCATGGAACGAGAAGTTATTGCTTGAGATTCCAATGCATGCAAGGTCCATCACGTTTGAAGTTCAATGCAAGAACTCAAGAGCAAGTAGTGCTAGACCCGTTGGGGTGGCAAGGATTGCTATTTCGGATATATTGTTAGGTGGTTCTAATGGGTTTGACGGCGACAGCAACGGCCACAATGTGCTGAGTTATAGGTTGAGGGATTGGGATGGAAGGAGAAATGGAGTTATTCATTTCTCCGTGAGGAGAATGACGGCGGCACCACCGGTCGAAAATACGGTGAAGGAGTTGGTGGAGGATCAGAAAAAGACTAAGGAATCTGGTGAAGAAGTTGTTCTTGGAGTTCCGGTATGGTGGAACTACCCTAATATTATTATTTGA | 552 | 0.4348 | MGVSSQTLEITVISGENVHVKEESYVVVRAESLKSCTTKAAKNTDIIINNNHCSSLISWNEKLLLEIPMHARSITFEVQCKNSRASSARPVGVARIAISDILLGGSNGFDGDSNGHNVLSYRLRDWDGRRNGVIHFSVRRMTAAPPVENTVKELVEDQKKTKESGEEVVLGVPVWWNYPNIII* | 184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo02g0598 | 183 | SMART | C2_3c | 7 | 110 | IPR000008 | - | |
| Amo02g0598 | 183 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 142 | IPR035892 | - | |
| Amo02g0598 | 183 | Pfam | C2 domain | 7 | 104 | IPR000008 | - | |
| Amo02g0598 | 183 | PANTHER | INGRESSION PROTEIN FIC1 | 5 | 180 | - | - | |
| Amo02g0598 | 183 | Gene3D | C2 domain | 3 | 169 | IPR035892 | - | |
| Amo02g0598 | 183 | PANTHER | BON1-ASSOCIATED-LIKE PROTEIN | 5 | 180 | - | - | |
| Amo02g0598 | 183 | ProSiteProfiles | C2 domain profile. | 1 | 113 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo02g0598 | Amo-Chr2 | 7813165 | 7814371 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo02g0598 | - | - | ahf:112726806 | 323.939 |