Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0550 ATGAAGTTGATGATGGCAAACATAGCAAGCTGTATCTTCTCCCTGCTTTATTTGTTGTCTCTAACTCTTTTCTTCTCTCCAACCCTTGGAAGAAGTATCAATAATAATAAGAAGCATGTGATTGGGTTGTTCATATTTGGGGATTCATTCTTAGATGCAGGAAACAACAATTACATAAACACAACACCATATGATCAAGCTAATTTCTTTCCTTATGGTCAAACCTACTTCAACTTCCCCACTGGCAGATTCTCTGATGGTCGCTTGATTTCAGATTTTATAGCTGAATATGCGAACCTGCCATTGATACCACCATTTCTACAACCTGGTAATTACACACAATTCTATGGTGGAGTGAACTTTGCGTCTGGTGGAGCAGGTGCTCTTGTTGAAACTTTTGAAGGTTCGAAAACGCAAATAAAAAACCATCTTATAAAACTTAAAAACAAAAAAACAAAACAATATTTTATAAATCCTTATGTAAATATAAATGCTGATGCATGGTATATTGGTATGGTGTATTGGCAGGGAATATATAAGAAAGGGGCTAGAAAGTTTGTGTTCATGAACTTGCCACCATTGGGTTGTCTTCCAGGGACCAGAATAATAAAGTCAGATGGAAATGGAAGCTGCTTACAACAACTTTCATCACTTGCAAAATTACATAATCAAGCTCTATCTTTGGCTCTCTTTAAATTGGAGAAGCAGCTAAAGGGCTTCAAATATTCTCTCTATGATTTCAATGCTGATGTAACTCAAATGATCAACCACCCCTTTAAATATGCATGCTGTGGGAGTGGAGCATTTAGAGGAGAGTACAGTTGTGGGGGTAAAAGAGGGAATAAGCATTTTGAGTTATGTGACAAACCCAATGAATATTTGTTTTGGGACTCATACCATCTTACAGAAAGTGCTTATAAACAATTGGCAACTAGGATCCATGCCTCTTATTATTGCTTGCCACAAAACCACAGAGCCCTATTCATATTTGGAGATTCATTGTTTGATAATGGAAACAATAACTACATCAACACCACCACTTTTCTTCAGTCAAATTTTCCTCCTTATGGCAAAACTTTTTTCAAATATCCCTCTGGAAGATTTTCTGATGGACGTGTAATACCAGATTTTATTGGTGGCTATGCAAAGTTACCGCTAATTCCGCCATATTTGCATCCTGGATACAACCATTATCAATACATTTATGGGGTGAATTTTGCATCAGCTGGAGCTGGTGCTTTAGTTGAAACTAATAAAGGAGCGGTGGTTGACTTGAAAACTCAGTCATTTTACTTTGGACAAGTTAGCAAGCAATTGAGGCAGGATCTAGGAGAAGAGGAAGCCGACAAAATGCTCTCAAAAGCTGTCTACATATTTTCCATTGGAGGAAATGACTATGCTGCCCCTTTCTATAGTGCAAATTCCAGCACTGCGCCTCTTCCATACCCTCCACAACAATTTGTAGACTTTGTGATTGGCAACATTTCTTCGGTGATCAAAGATATCTATAATGAAGGTGGAAGAAAATTTGGATTTTTAAATGTGTATCCATTGGGATGCATACCACTTCTAAGGATACTTATTGCTGAAAACAGCTTTGATGATTGCTTGCAACAAGAAGCTACCGTTCTTGCAAGGCTTCATAACAATGAACTTCCCAAAAACCTTCAGAAGCTTGAGAAAGAGTTAAGTGGATTCAAATATTCACTCACCGATATCTACGCTGCATTTCTTGACCATATGGAAAACCCTTCTAAATATGGTTTCAAAGTGGGGAGTGAAGCTTGCTGTGGAGGTGGTCGTTATGGAGGAGATTATAGTTGTGGAGGGAAAAGAGGAATTGAAACATATCATGTATGTAACAATTCTAATGACTATGTTCTCTTTGATGCTGCTCATCCCACTGATAAGGCTGCTAACCATATTTCCCAGATCATGTGGATTGGAGGTGATACACATCCTAAACAATCTTCTCACAATCTCAAACAACTCTTCCAGCTTTGA 2004 0.3797 MKLMMANIASCIFSLLYLLSLTLFFSPTLGRSINNNKKHVIGLFIFGDSFLDAGNNNYINTTPYDQANFFPYGQTYFNFPTGRFSDGRLISDFIAEYANLPLIPPFLQPGNYTQFYGGVNFASGGAGALVETFEGSKTQIKNHLIKLKNKKTKQYFINPYVNINADAWYIGMVYWQGIYKKGARKFVFMNLPPLGCLPGTRIIKSDGNGSCLQQLSSLAKLHNQALSLALFKLEKQLKGFKYSLYDFNADVTQMINHPFKYACCGSGAFRGEYSCGGKRGNKHFELCDKPNEYLFWDSYHLTESAYKQLATRIHASYYCLPQNHRALFIFGDSLFDNGNNNYINTTTFLQSNFPPYGKTFFKYPSGRFSDGRVIPDFIGGYAKLPLIPPYLHPGYNHYQYIYGVNFASAGAGALVETNKGAVVDLKTQSFYFGQVSKQLRQDLGEEEADKMLSKAVYIFSIGGNDYAAPFYSANSSTAPLPYPPQQFVDFVIGNISSVIKDIYNEGGRKFGFLNVYPLGCIPLLRILIAENSFDDCLQQEATVLARLHNNELPKNLQKLEKELSGFKYSLTDIYAAFLDHMENPSKYGFKVGSEACCGGGRYGGDYSCGGKRGIETYHVCNNSNDYVLFDAAHPTDKAANHISQIMWIGGDTHPKQSSHNLKQLFQL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0550 667 CDD SGNH_plant_lipase_like 326 647 IPR035669 -
Amo02g0550 667 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 318 666 IPR044552 -
Amo02g0550 667 CDD SGNH_plant_lipase_like 43 313 IPR035669 -
Amo02g0550 667 PANTHER GDSL ESTERASE/LIPASE 5 318 666 - -
Amo02g0550 667 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 150 IPR044552 -
Amo02g0550 667 Gene3D SGNH hydrolase 320 648 IPR036514 -
Amo02g0550 667 Gene3D SGNH hydrolase 31 172 IPR036514 -
Amo02g0550 667 Gene3D SGNH hydrolase 173 317 IPR036514 -
Amo02g0550 667 PANTHER GDSL ESTERASE/LIPASE 5 176 314 - -
Amo02g0550 667 Pfam GDSL-like Lipase/Acylhydrolase 327 644 IPR001087 GO:0016788
Amo02g0550 667 Pfam GDSL-like Lipase/Acylhydrolase 43 312 IPR001087 GO:0016788
Amo02g0550 667 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 176 314 IPR044552 -
Amo02g0550 667 PANTHER GDSL ESTERASE/LIPASE 5 8 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0550 Amo-Chr2 6848728 6862250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0550 326 649 Acyl Lipid Metabolism Gene Families AT4G10950 30.887 4.75e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0550 - - vri:117922366 574.704