Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0533 ATGCTACCAAAGTTCATGAGTTCTTTCATGGTGGAAACACAAGAAGAAGAAAAAAGGAACAATCACAATAACAAGAATAATAATAATAGCATGGATGTTGTTGTTGGTTTGAGGCTTCTCACAAGCTCATCATCAAAGAGCAATGTTCTTGTGAAATCTTCACTACTCTTAGTGAGAAATAAAGCATATAATCATCATAATCATCAAATCCAAACATGCCCTCAACAACCTCAAGAAGATTATTGCTTCCTTAAAACTTGTAACCTTTGCAATAAGCAGCTTAGATCTGACAAGGATATCTACATGTACAGGGGTGACCAAGGTTTCTGCAGCGTAGAGTGTAGGAACAGACAAATAGTTTTGGATGATTTGAGAGAATTAGAGAATTCTACAAAGCAAATGGTTGCATCTTATAATAATAGGACACACCATTGTTGCAATGATGCACGCTTAGAAACTCGTCTCATACTTGAAGACCTCAGAATGCAAAGACTCAAATATAGACTCTAA 510 0.3588 MLPKFMSSFMVETQEEEKRNNHNNKNNNNSMDVVVGLRLLTSSSSKSNVLVKSSLLLVRNKAYNHHNHQIQTCPQQPQEDYCFLKTCNLCNKQLRSDKDIYMYRGDQGFCSVECRNRQIVLDDLRELENSTKQMVASYNNRTHHCCNDARLETRLILEDLRMQRLKYRL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0533 169 MobiDBLite consensus disorder prediction 1 30 - -
Amo02g0533 169 Pfam zinc-finger of the FCS-type, C2-C2 75 123 IPR007650 -
Amo02g0533 169 ProSiteProfiles Zinc finger FLZ-type profile. 82 126 IPR007650 -
Amo02g0533 169 PANTHER FCS-LIKE ZINC FINGER 17 1 166 IPR044181 -
Amo02g0533 169 Coils Coil 162 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0533 Amo-Chr2 6579646 6580760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0533 - - adu:107473203 325.865