Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0525 ATGGATGTAGTAGACAAGACATTTTCTGATATTGTCAACGTCATCAAATCATGGATTCCCAGGCGATCCGAACCAGCAAATGTGTCCAGGGATTTTTGGATGCCTGATCAGAGTTGTAGGGTATGCTACGATTGTGATTCCCAGTTCACCTTATTCAATCGAAGGCACCACTGTCGCCTTTGTGGACGAATTTTCTGTAACAAGTGTACTGCAAACTCAATTCCTGCTCCAGTTACCAGCCAGATCAATCCTTGGGATGAGTGGGAAAAGATTCGCGTATGCAATTTTTGTTACAAGCAATGGGAGCAAGGAGTAGTTGCTTTTAATAACAATACACAGGTTTCCAATCTGGATTGCAGRGCTACATTATCAACTTTGAGCTCGGTTAGCAGTAAAACCAGTGTRACTGCTGACAGTACTAARATTACTCTTTTCTCCATGCCTTATTCAGCCGGGCCTTATCAACAAATGCAACAGGGTCCGTGTCTGAACTTGCATCAGTCTCCTATGAGTGGAAACAACACTGATAGGGAAGTTTTATCACCTCCATTAGGGGGGAGGAATGATCTTGCAGGAGACATAGGGGATCCATTACAAAAGCAATTTGAATTCCCTATGAACAGGAGTGATGATGAGGATGAGTATGGTGTATATCAGTTAGACTCTGAGATGAGACATTATCCTCAGGTGAATATCTACTATGGACAGGCTGAGTTTGAAGGAATAAGCAACACTGATGGCTCGCAGAAAGTGCATCCTGATGCAGATAACGGTAATGCAAATCTCACTTCAGAGAARGGATTCGACACACAGGGTTTAGAAAGAAACACAGCAGTTGGGAAGAGTGAGGATGAACCTTATATATATGAAAATGAAGCACCTTCCTCACTATATGTTTCAGAAGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGCAGAAGACGAGCGAGAAACTTTTTTTGTTGATGAAGATGATGAAGATAATGACGGGAATGGGAATGCCATTGGTGAGTGGGGATATCTGCGCAATTCAAACAGTTTTGGAAGTGGAGAGCATCGCCACAAGGATAGGACAAGTGAGGAGCAGAAGAAGGTAATGAAGAATGTAGTAGATGGACATTTTAGGGCATTGGTGGCTCAGCTGTTACAGGTCGAAAACCTACCTGTTGAAGACAATGGTGAAAACGTTTGGATGGAAATAATCACATCTCTCTCGTGGGAAGCTGCTACTTTATTGAAGCCAGATACTAGCAAAAGTGGAGGGATGGACCCAGCTGGTAATGTGAAAGTCAAATGCATTGCATGTGGCAGCCGCATTGAAAGTACGGTTGTTAAAGGAGTTGTTTGTAAGAAGAATGTGGCTCATCGTCGCATGACATCAAAAGTTGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTTGAGTACCAGCGTGTTGCTAATCTGTTGTCTAGTGTAGATACCTTATTACAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCCTCTCATCAACCAAATATCCTTTTGGTAGAGAAATCAGTCTCGAGATATGCACAGGAATATCTTCTTGCAAAAGACATATCTCTGGTACTTAATGTCAAGAGGCCACTTCTGGAGCGCATAGCACGTTGCACAGGCACTCAAATTGTGCCTTCAATTGATCATCTTTCATCACCAAAGTTGGGTTACTGTGAAGCTTTTCATGTTGAAAAGTTTGTTGAAAATCTTAGTAGTGCTGCTGCTCAAGGTGGTAAAAAACCAATGAAAACATTGATGTTTTTTGACGGCTGCCCAAAGCCATTGGGTTGCACAATTTTACTTAAAGGTGCTGATGAGGAAGAATTGAAGAAGGTAAAGCATGTGGTTCAGTATGCAGTTTTTGCAGCTTACCATCTGGCTTTGGAGACATCTTTTCTTGCTGATGAAGGAGTCTTCTTCCCAGAAATTCCGCTTAACAGTCTGCCTCTTCCTAARACAACATCAACCATTCAGAGGTCAATCTCAACAGTTCCTGATTTCGTTGCTCCTAGCAGTGAAAAGTCTCAGGGGCTTGAATCCGAKACTGGACCACYGAGAACTAAGAGTGTCAGCAGTACTGAATCCTATTTGCCTAATGATGATCCTTGTGAATCTTTGCAATCTGCATCATGTATCAGCCATACAACTGCCTTTTATTCTTCCATTGTCGCTTCTGGAAATGCAATTCCAGGTTCATACAATGAGAAAATTCTTCCTAGTAAATACACAAATGACTCCACACAACCCCTGGAGGAGGAAACTCCTGAAGTGAACAACTCTTTGGGAATCATGAATGATCCTACTGTAAACGGTTATGGACCTGCAGAGAAATTAGATCATGGTATTTTAGCTGACACTACGCAAAATGATCTCAAGCAAATCTCTACAAACCGATCAACTGTGTTAGAGTTATCTTCAGAAGATGTTCAACCTGAGAAGGCTGGAATCACAAATGAAGAGAAGGTTCCTGAGGAAGAAGCGTTTCCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCATCTCGGTGCGTGTGGAAGGGAACTATGTGTGAGAGATCCCAGCTCTTTCGAATCAAATATTATGGCAGCTTTGATAAACCACTGGGTCGGTTTCTTCGGGACCATTTGTTTGATCAGAGTTTTCGATGCCATTCTTGTGAAATGCCATCGGAAGCACATGTGTATTGTTATACTCATCAACAGGGAACACTTACCATATCAGTCAAGAAACTACCAGAAATTCTCCTTCCTGGTGAAAGGGAGGGAAAGATTTGGATGTGGCATAGATGCTTGCGGTGTCCAAGAATCAATGGCTTTCCTTCTGCTACACAGAGAATAGTAATGTCTGATGCRGCATGGGGTTTATCATTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTTGCAAGCTGTGGTCATTCTTTACACAGAGATTGTCTACGTTTTTATGGATTTGGGAATATGGTCGCTTGCTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCACACAAACTTGATTTTGATTATGGGAGTCAGGATTGGATACAAAAGGAATCAGATGAGATGGTTAAACGGGCAGAGGTTTTATTCTCCGAGGTACTCAATGGTCTTAGCAAAATAGGCGAGAAGAGATCAAGGGCTGAACTGGAGGGAATGTTGCAAAGGGAAAAACTGGAATTTGAGGAAATGCTTCATAAGGTTTTGAACCAGGAAAAGAGAAAGGGCCAACCTGAGATTGACATTCTGGAAATTTATCGATTGCGGAGGCAGTTACTTTTCCAGTCATATATGTGGGATAGCCGCCTAATCACTGGGGTCAACTTATTCAAGTCTAGCGATGAAACTGATTTAAGCAGTACAAGTTCAGAGGATAAGGAAATACATGTTGATGAAAATCAGATAAGCGTGACCACTACAGCAGGAAGCCGCTTCAAAAGTGTTGACTCTATTGATGGTGATCCAAAAAAGCTGAAAAGAAGCCCAAGTGTTGGAGGAGTAGGAGGGGGTTATGTAAAAGATTCCCAATCTGTTGCATTTCATCGAGATATCGACATGCCCAAAAATACCAARCATAAGAAAGAAGACCAACCTAATCTTCCAATCAGCAAAAGCATATATGARCCATCTGAGCCCTTAGAACCTGAATTGCGTGTTCGCAGAGCAATGTCTGAAGGKCCAATGTCTCTCATGTCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGGAGACCACTCTTCGGCACAGCCTGATTCATTTCTGGCAGAAGCTACCACAACTTCGATGCTGAAAGAAGCATCCACTGTTGGGGATCATGCCGAAGACCAGAATGCCAACAAGAGTATCTTTTCTTCTAAGGGTCAAGATAACATGGAAGACTCTTCAAGTTGGTTAGCAATGCCCTTCTTAAACTTCTATCGCCAGTTTAACAAGAATCTTTTTTCTAGTACAACAAAGTTTGATACACTAGTCGACAGCAATCCGGTTTATGTATCATCCTTCTGGAATCTGGAACTCCTAGGTGGTGCAAGGWTGCTTCTGCCTATTGGTGTTAATGACACTGTCATTCCAATATATGATGATGAACCCTCAAGTGTTATAGCTTATGCCTTGACGTCACCAGAATACCATTCCCAATTGAATGARGATGTAGAGCGACCGAAAGATGCGAGTGATTTAGGTTCATCATATTTTTCTGAATCAACCACCTTACAGTCATACTCTTCTACTGATGAAATAGCTTTTGATCTTCAYAAGAGTTTCGGGTCAGTAGAGGAGATGTTATTGTCAATGCCATCTCGTAACTCYTTGATGCTAGACCCAACATTATATTCAAAGACGATGCATGCCAAAGTTTCTTTCGGAGAAGATGGTCCCCTCGGCAAAGTAAGATATTTGGTGACTTGTTATTATGCCAAGCGATTTGAAGCCTTAAGAAGGGTCTGCTGTCCTTCAGAGTTTGATTATATAAGATCTTTGAGTCGCTGTAAGAAATGGAAAGCTCAAGGTGGGAAGAGCAATGTATTRTTTGCAAAAACATTGGATGATCGATTCGTCATTAAACAAGTAACAAAAACTGAGCTTGAATCATTCATTAAATTCGGGCCTGGATACTTCAAATATCTTTCAGAATCCATTGGCTCAGGAAGTCCCACATGCCTCGCAAAGATTCTTGGCATATACCAGATTACATCAAAGCATCTCAAAGGAGGGAAAGAATCAAAGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGAACTGTGACGCGACTTTATGATCTCAAAGGATCTTCCAGGTCCCGGTACAATCCAGATCCTAACGGGAGGAACAAAGTTCTGCTAGACCAGAACTTGATTGAAGCAATGCCGACTTCTCCTATTTTCGTGGGAAACAAYGCAAAACGGTTGTTAGAGCGAGCCGTCTGGAATGATACCGGCTTTCTTGCATCGGTTGATGTAATGGACTATTCGCTACTCGTCGGGGTGGATGAAGAGAAGCATGAGTTAGTTCTTGGGATCATTGATTTCATGAGACAGTATACATGGGACAAGCATCTTGAAACATGGGTAAAGGCTTCCGGCATCCTCGGAGGGCCAAAGAATGCYTCTCCGACGATTATATCGCCAAAGCAGTACAAGAAAAGGTTCCGGAAAGCGATGACCACTTACTTTCTCATGCTTCCTGATCAGTGGTCACCTCCAGCCATAGTTGGAAGTTCATCACAGTCTGATTTAGGTGAAGATTACACTCAAGGTAGGTCCTCAGTTGAATGA 5391 0.4222 MDVVDKTFSDIVNVIKSWIPRRSEPANVSRDFWMPDQSCRVCYDCDSQFTLFNRRHHCRLCGRIFCNKCTANSIPAPVTSQINPWDEWEKIRVCNFCYKQWEQGVVAFNNNTQVSNLDCRATLSTLSSVSSKTSVTADSTKITLFSMPYSAGPYQQMQQGPCLNLHQSPMSGNNTDREVLSPPLGGRNDLAGDIGDPLQKQFEFPMNRSDDEDEYGVYQLDSEMRHYPQVNIYYGQAEFEGISNTDGSQKVHPDADNGNANLTSEKGFDTQGLERNTAVGKSEDEPYIYENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDAEDERETFFVDEDDEDNDGNGNAIGEWGYLRNSNSFGSGEHRHKDRTSEEQKKVMKNVVDGHFRALVAQLLQVENLPVEDNGENVWMEIITSLSWEAATLLKPDTSKSGGMDPAGNVKVKCIACGSRIESTVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVANLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERIARCTGTQIVPSIDHLSSPKLGYCEAFHVEKFVENLSSAAAQGGKKPMKTLMFFDGCPKPLGCTILLKGADEEELKKVKHVVQYAVFAAYHLALETSFLADEGVFFPEIPLNSLPLPKTTSTIQRSISTVPDFVAPSSEKSQGLESXTGPXRTKSVSSTESYLPNDDPCESLQSASCISHTTAFYSSIVASGNAIPGSYNEKILPSKYTNDSTQPLEEETPEVNNSLGIMNDPTVNGYGPAEKLDHGILADTTQNDLKQISTNRSTVLELSSEDVQPEKAGITNEEKVPEEEAFPPSPSDHQSILVSLSSRCVWKGTMCERSQLFRIKYYGSFDKPLGRFLRDHLFDQSFRCHSCEMPSEAHVYCYTHQQGTLTISVKKLPEILLPGEREGKIWMWHRCLRCPRINGFPSATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGNMVACFRYASIDVHSVYLPPHKLDFDYGSQDWIQKESDEMVKRAEVLFSEVLNGLSKIGEKRSRAELEGMLQREKLEFEEMLHKVLNQEKRKGQPEIDILEIYRLRRQLLFQSYMWDSRLITGVNLFKSSDETDLSSTSSEDKEIHVDENQISVTTTAGSRFKSVDSIDGDPKKLKRSPSVGGVGGGYVKDSQSVAFHRDIDMPKNTKHKKEDQPNLPISKSIYEPSEPLEPELRVRRAMSEGPMSLMSSLSDTLDAKWTGGDHSSAQPDSFLAEATTTSMLKEASTVGDHAEDQNANKSIFSSKGQDNMEDSSSWLAMPFLNFYRQFNKNLFSSTTKFDTLVDSNPVYVSSFWNLELLGGARXLLPIGVNDTVIPIYDDEPSSVIAYALTSPEYHSQLNEDVERPKDASDLGSSYFSESTTLQSYSSTDEIAFDLHKSFGSVEEMLLSMPSRNSLMLDPTLYSKTMHAKVSFGEDGPLGKVRYLVTCYYAKRFEALRRVCCPSEFDYIRSLSRCKKWKAQGGKSNVLFAKTLDDRFVIKQVTKTELESFIKFGPGYFKYLSESIGSGSPTCLAKILGIYQITSKHLKGGKESKMDVLVMENLLFRRTVTRLYDLKGSSRSRYNPDPNGRNKVLLDQNLIEAMPTSPIFVGNNAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIISPKQYKKRFRKAMTTYFLMLPDQWSPPAIVGSSSQSDLGEDYTQGRSSVE* 1797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0525 1796 MobiDBLite consensus disorder prediction 1222 1324 - -
Amo02g0525 1796 SUPERFAMILY SAICAR synthase-like 1494 1763 - -
Amo02g0525 1796 SUPERFAMILY GroEL apical domain-like 453 626 IPR027409 -
Amo02g0525 1796 MobiDBLite consensus disorder prediction 1263 1324 - -
Amo02g0525 1796 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1538 1705 IPR002498 GO:0016307|GO:0046488
Amo02g0525 1796 MobiDBLite consensus disorder prediction 691 722 - -
Amo02g0525 1796 MobiDBLite consensus disorder prediction 1180 1207 - -
Amo02g0525 1796 MobiDBLite consensus disorder prediction 335 374 - -
Amo02g0525 1796 SMART PIPK_2 1477 1764 IPR002498 GO:0016307|GO:0046488
Amo02g0525 1796 Gene3D - 1622 1764 - -
Amo02g0525 1796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 113 IPR013083 -
Amo02g0525 1796 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1442 1763 IPR002498 GO:0016307|GO:0046488
Amo02g0525 1796 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1440 1620 IPR027484 -
Amo02g0525 1796 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1786 - -
Amo02g0525 1796 MobiDBLite consensus disorder prediction 1776 1796 - -
Amo02g0525 1796 MobiDBLite consensus disorder prediction 244 267 - -
Amo02g0525 1796 CDD Fab1_TCP 388 660 - -
Amo02g0525 1796 CDD FYVE_PIKfyve_Fab1 32 99 - -
Amo02g0525 1796 SMART fyve_4 28 103 IPR000306 GO:0046872
Amo02g0525 1796 MobiDBLite consensus disorder prediction 158 178 - -
Amo02g0525 1796 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Amo02g0525 1796 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1786 - -
Amo02g0525 1796 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Amo02g0525 1796 Coils Coil 1082 1102 - -
Amo02g0525 1796 Gene3D GroEL 452 626 IPR027409 -
Amo02g0525 1796 Pfam TCP-1/cpn60 chaperonin family 408 649 IPR002423 GO:0005524
Amo02g0525 1796 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Amo02g0525 1796 CDD PIPKc_PIKfyve 1500 1763 IPR044769 GO:0000285
Amo02g0525 1796 MobiDBLite consensus disorder prediction 158 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0525 Amo-Chr2 6485367 6494262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0525 2 1796 EF-hand Containing Proteins AT3G14270 57.688 0.0 1965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0525 K00921 - gmx:100819364 2616.26