Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0438 ATGGCAACAATGATGACTGCTTCAAGCAACTTAGTCTCAAGAAGTTCATCATATGTTTCCCATGGACCAATTTTCTCATGTGAGTCTAAAGTGTCACCCATGGAACTAAAGCACACCAACAATCATAATGGACTAAGAGTCTTGAACCAWGTGGATGAGATTCTGAACAGAACCCAAATTAAAGTTAGTGCAGCAAAATCAAAGAGGAWGGGACTTCAAAGCAAGAGAGGTAAGCCTAAAGGTGTRATCATATGTGGAATGACTTTGATCTTTGTGGGAACTGAGGTTGCTCCTTGGAGCAAAACCGGCGGCTTAGGCGATGTAATCGGAGGTCTGCCACCAGCATTGGCAGCTAATGGACATCGAGTTATGACAATRYCGCCGCGATATGATCAGTACAAAGATGCATGGGATACAAGTATTCAAGTTGAGGTTTGGGGCAAAACCGGAACCAAASTTTATGGACCTTATGCAGGGGAAGATTACCAAGACAATGAACTACGTTTTAGCTTGTTCTGCCAGGCAGCATTGGAAGCACCAAGGGTTCTGAATCTTAAGAGCAATAAATACTTTTCTGGGCCATATGGCGAAGATGTCATTTTTATCGCCAATGATTGGCACACGGCCCTTCTCGCTTGCTACCTGAAATCCATGTACCAATCAAGAGGKATCTATAAGAATGCAAAAGTCATTTTTTGTATCCACAACATTGCTTACCAAGGAAGATTCGCATTCGAAGACTTCTCGCTTCTCAATCTCCCTGACCAATTTAAAAGCTCATTTGACTTCATTGATGGACATGTTAAACCAGTAATAGGAAGGAAAATTAATTGGATGAAAGCTGCAATCATAGAATCATCCATGGTGTTAACTGTTAGTCCATACTATGCTAAAGAACTAGTCTCAGGTCCTGACAAAGGAGTTGAATTGGACAACATCCTTCGCCGAACCGGCATCATTGGAATTGTCAARGGCATGGATGTGCAGGAGTGGAATCCGTCCACCGATAAATATATTGCTGTCCGATACGACACTTCAACGGTGTTGGAAGCAAAATATATTTTGAAAGAAGCTCTCCAAGCTGAAGTTGGATTGCCAATAGATAGAAACATTCCTCTCATTGGATTCATTGGTAGGCTTGAAGAACAAAAAGGTTCTGATATTCTTGTAGCTGCTATTCCCCAATTGACTGAGGAGAATGGAACAGGAAAGAAACAAATGGAGAAACAGCTTCAACAACTTGAAACATTATACCCAGACAAGGCCAGAGGAGTTGCAAAATTCAATGTTCCTTTAGCTCATATGATCATTGCTGGTGCTGATTTTCTARTGGTTCCTAGCAGATTTGAGCCTTGTGGTCTTATTCAACTACAAGCTATGCGCTATGGAACTGTACCTATTGTTGCCTCAACTGGTGGATTAGTTGACACAGTTCAAGAAGGTTTCACAGGATTTCAGATGGGTCCCTTCAATGTTGAGAGTCTGTTTACTCTCAGTATTATTTATAGAATTTCATGGAAG 1521 0.4109 MATMMTASSNLVSRSSSYVSHGPIFSCESKVSPMELKHTNNHNGLRVLNXVDEILNRTQIKVSAAKSKRXGLQSKRGKPKGVIICGMTLIFVGTEVAPWSKTGGLGDVIGGLPPALAANGHRVMTXXPRYDQYKDAWDTSIQVEVWGKTGTKXYGPYAGEDYQDNELRFSLFCQAALEAPRVLNLKSNKYFSGPYGEDVIFIANDWHTALLACYLKSMYQSRGIYKNAKVIFCIHNIAYQGRFAFEDFSLLNLPDQFKSSFDFIDGHVKPVIGRKINWMKAAIIESSMVLTVSPYYAKELVSGPDKGVELDNILRRTGIIGIVKGMDVQEWNPSTDKYIAVRYDTSTVLEAKYILKEALQAEVGLPIDRNIPLIGFIGRLEEQKGSDILVAAIPQLTEENGTGKKQMEKQLQQLETLYPDKARGVAKFNVPLAHMIIAGADFLXVPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVQEGFTGFQMGPFNVESLFTLSIIYRISWK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0438 507 Gene3D Glycogen Phosphorylase B; 90 326 - -
Amo02g0438 507 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 154 485 IPR011835 GO:0004373
Amo02g0438 507 CDD GT5_Glycogen_synthase_DULL1-like 90 503 - -
Amo02g0438 507 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 7 145 - -
Amo02g0438 507 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 146 493 - -
Amo02g0438 507 Pfam Glycosyl transferases group 1 368 495 IPR001296 GO:0016757
Amo02g0438 507 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 496 - -
Amo02g0438 507 Pfam Starch synthase catalytic domain 90 315 IPR013534 -
Amo02g0438 507 Gene3D Glycogen Phosphorylase B; 327 493 - -
Amo02g0438 507 PANTHER GRANULE-BOUND STARCH SYNTHASE 7 145 - -
Amo02g0438 507 PANTHER GRANULE-BOUND STARCH SYNTHASE 146 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0438 Amo-Chr2 5435419 5440802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0438 1 493 Glycosyltransferase AT1G32900 64.486 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0438 K13679 - gmx:100037476 765.377