Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0421 ATGGCTGAAGTAGTGAGGAACAAGAGGGTTGTTCTGAGGAACTATGTCACTGGTTTCCCCAAAGAATCAGACATGGAAATTGTGGAAGGAACCATAACTTTGAAGGTTCCAGAAGGTTCCAAGGAGGTGCTGCTCAAGAACCTCTACTTGTCATGTGATCCTTTCATGAGGAATCTCATGAACAAGCCCCAAGGCACTGAGACCAGCAGTGGCCTTAACTATACTTCTGGATCTGCAATAGGTGGGTTTGGTGTGTCCAAGGTGATAGATTCTGGAAGCCCAGATTATAAGTATGGGGATTTAGTATGGGGGCTTACTAAATGGGAGGAGTACAGCTTGGTCCCTTCATCTCAAATAATCTCCAAAATTCAGCACACTGATGGTGTTCCACTTTCTTACTATACTGGAATTCTTGGCATGCCAGGAGTGACTGCTTATGCAGGTCTCTTTGAAGTAGGCTCTCTCCAAAAAGGGGAGAGAGTTTTCGTTTCGGCTGCTTCCGGCGCAGTCGGCCAACTTGTCGGACAATTCGCTAAACTTACAGATTGTTATGTTGTGGGAAGTGCTGGAAGTAAAGACAAGGTGGATCTGTTAAAGAATAAATTTGGATTTGATGAAGGTTTTAACTATAAAGAAGAGCCTGACCTCAATGCAGCTTTAAAGAGGTATTTTCCGGAAGGCATTGATGTTTACTTTGAGAATGTGGGAGGAAAGACGCTTGATGCCGTGCTCCTCAACATGAGAGTCCAGGGTCGCATACCGGCTTGTGGAATGATATCGCAGTATAATCTAACTCAACCGGAAGGTGTAACGAATTTGGCTAACATTGTATATAAGAAGATTCGTATGCAGGGTTTTCATTTCTTCGATTATGTTAACCTGTATCCAAAATTCTTGGAGTTTGTCCTCTCTCATCTCAAAGAAGGGAAGATTGTTTATGTGGAAGACATAGCTGAAGGTCTTGAGAACGGCCCTGCAGCCTTGGTTGGCCTTTTTAGCGGTCGCAATTTCGGAAAACAAGTGCTTCTTGTTGCTCCTGAATAA 1044 0.4377 MAEVVRNKRVVLRNYVTGFPKESDMEIVEGTITLKVPEGSKEVLLKNLYLSCDPFMRNLMNKPQGTETSSGLNYTSGSAIGGFGVSKVIDSGSPDYKYGDLVWGLTKWEEYSLVPSSQIISKIQHTDGVPLSYYTGILGMPGVTAYAGLFEVGSLQKGERVFVSAASGAVGQLVGQFAKLTDCYVVGSAGSKDKVDLLKNKFGFDEGFNYKEEPDLNAALKRYFPEGIDVYFENVGGKTLDAVLLNMRVQGRIPACGMISQYNLTQPEGVTNLANIVYKKIRMQGFHFFDYVNLYPKFLEFVLSHLKEGKIVYVEDIAEGLENGPAALVGLFSGRNFGKQVLLVAPE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0421 347 Gene3D - 10 342 - -
Amo02g0421 347 SMART PKS_ER_names_mod 43 342 IPR020843 GO:0016491
Amo02g0421 347 Pfam Zinc-binding dehydrogenase 169 302 IPR013149 -
Amo02g0421 347 Pfam N-terminal domain of oxidoreductase 8 118 IPR041694 -
Amo02g0421 347 PANTHER PROSTAGLANDIN REDUCTASE 4 345 IPR045010 GO:0016628
Amo02g0421 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 305 IPR036291 -
Amo02g0421 347 SUPERFAMILY GroES-like 287 342 IPR011032 -
Amo02g0421 347 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 4 345 - -
Amo02g0421 347 SUPERFAMILY GroES-like 4 174 IPR011032 -
Amo02g0421 347 CDD double_bond_reductase_like 5 344 - -
Amo02g0421 347 Gene3D - 137 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0421 Amo-Chr2 5207485 5210730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0421 K19825 - gmx:100809668 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0745 19 11606321 11610053 Amo02g0421 02 5207485 5210730 hybridization