Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0417 ATGGACCAGAAAGAATCTGTTAGGGACATAACTCCTTGGGATGGGACTCTTTCTTCAAGTGACTTTTTTAGTGCTGCTTGTGCCTTTTCTGAGAAGTGGAAAAGGTTCAATGCTTCTGTTCCTCCATGGCTTTGGGTACCATCTCGAAAGCATCATTTATTATCTTCTCATAAGGAGGAAGGATACTTATCACTAGAGGGCATGTGCCTTATCAAATCAAGTGAGGAGCAAGAGAGTTGTAGAAGTCAAACATGGAAAGAAGAGAGCAGCATCTCTCAAGAAGAAGAAGCTGTAGAAAATGCCACTTTAATGGGCAACCTTTGCCGTTTGGTGAAATTGAAAAGGACCTTCCTGATCACTCTGCAAAGATACGTTCAGAATCTAAATGGACTTTTATAA 399 0.4085 MDQKESVRDITPWDGTLSSSDFFSAACAFSEKWKRFNASVPPWLWVPSRKHHLLSSHKEEGYLSLEGMCLIKSSEEQESCRSQTWKEESSISQEEEAVENATLMGNLCRLVKLKRTFLITLQRYVQNLNGLL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0417 132 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 10 105 IPR007135 GO:0019787
Amo02g0417 132 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 10 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0417 Amo-Chr2 5171509 5174547 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0417 K17888 - gmx:100786914 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0742 19 11533536 11537294 Amo02g0417 02 5171509 5174547 hybridization