Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0415 ATGGAAGACACGGATTCAGTTGCTACACTGATAGATTCAACAAGTTCTAAGATAAAACAGCTCCAAAAGGCATTTGCTGAACTTGAAAGCTATCGAGCTGTTACACTTAACTTGAAATGGAAAGAGCTTGAGGAACATTTCCATGGACTTGAGAAATCGTTGAAGAGACGCTTTCATGAATTGGAGGACCAAGAGAAAGAGTTTGAAAACAAAGTGGTGAAGTCTCGTGAAATATTGGAGAAGCGGGAAGCGACTGTTTGTGCCAAGGAGCAAGCTTCTTTGCAGAAACTTCAAGATAAAAGAGATGCTGCTGTATTTGCCATTTTTAACGCCCGAGAAAAGCACAGGAAGGTTTCATCAAAAGATCTGGACATTTTCCCCGGTGGGAGGCAACGGACACCTGGAGTGGTGGAGAAACCAGTGGATTCTGTGTCCACTCCTGCTGAAGGTAACTTGGAAGATGTAAAACTTTCTCCTGAAGGTGGAAATGTGGATCTATTATCTTATCCAGAGTTGGTAAAGCTATGTAAAGAAATGGATGCTAGAGGTCTTCACAAATTCATATCTGATAACCGTAAGAATCTTGCTGCTATAAGGGATGAAATACCACATGCATTAGGAGCTGCTCCTAATGCTGCCTGTTTAGTTTTAGATTCTTTGGAAGGATTTTACTGTGCAGAAGCTTCAAATCAGGATGTAAAGAAGGATGCTAACTTATTGGGCCTTCGTCGAACCTGTATCATGTTGATGGAATGTTTGTACGTTTTCTTGAACAACTCAGATGGTGTCTATAATGAACTTTTAGAAGATATCAAGGACAGGGCAAAAGCAGTTGCTGAAGAGTGGAAACCCAGATTGGATGCTCTAGATGCGGATGCTGGCAATGGGAATTCCTTAGAGGCTCATGCATTTTTGCAACTTCTAGCAAGTTTTGATATTGCCTCTGATTTTAATGAGGAGGAGTTTTCCAGGTTCATTCCAATGGTTTCTCGGCGTCGCCAAACTGCTGATTTGTGCCGTTGCCTTGGGTTGTCTGAGAAAATGCCTGGCGTAATTGAAGTATTGGTGAACAGCGGGCGGCAAATTGATGCAGTTAATTTGTCTTTTGCATTCAATCTTACGGAACAGTTTTCTCCCACGGATTTATTGAAGTCTTACTTGAAGGATGCCAAAAAAGCTGCATCTCCTTCCAGATGTGTTAACTCATCTCCCACTACACAGGTTGAGGTTAATGAGCGAGAACTGGTTGCCCTTAAGTCCATAATCAAGTGCATCGAAGAACATAAACTCGAGGAGCAGTATCCTCTAGATCCTCTCATGAAACGGGTGGTCCAACTCGAGAAAGCCAAAGCAGACAAGAAGAGGGAAACTGAAGCAACAAAGCCTCAACCGAAGAGACCCCGTGCTAATGGTGTGGGATATGGTCTGCGTGTTTCTAACTTCCCTTCTGACAAAGCCTCCTATCCTAGAGCCGCTGACAGGTACCCACAGTACGTATTCGACCGGCCTTATGTGTACCCTGGACCAACTGACAATCATTGCCCCCCTCTCATGGGGTCCACGACCTATAACTTCACCCTGAGTCATGGCAACTACTTTGGAAATGGCTATCAATACCAGCCAACATATCTCCATTAG 1638 0.4365 MEDTDSVATLIDSTSSKIKQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKVVKSREILEKREATVCAKEQASLQKLQDKRDAAVFAIFNAREKHRKVSSKDLDIFPGGRQRTPGVVEKPVDSVSTPAEGNLEDVKLSPEGGNVDLLSYPELVKLCKEMDARGLHKFISDNRKNLAAIRDEIPHALGAAPNAACLVLDSLEGFYCAEASNQDVKKDANLLGLRRTCIMLMECLYVFLNNSDGVYNELLEDIKDRAKAVAEEWKPRLDALDADAGNGNSLEAHAFLQLLASFDIASDFNEEEFSRFIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNSGRQIDAVNLSFAFNLTEQFSPTDLLKSYLKDAKKAASPSRCVNSSPTTQVEVNERELVALKSIIKCIEEHKLEEQYPLDPLMKRVVQLEKAKADKKRETEATKPQPKRPRANGVGYGLRVSNFPSDKASYPRAADRYPQYVFDRPYVYPGPTDNHCPPLMGSTTYNFTLSHGNYFGNGYQYQPTYLH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0415 545 Pfam Frigida-like protein 169 457 IPR012474 -
Amo02g0415 545 MobiDBLite consensus disorder prediction 136 155 - -
Amo02g0415 545 PANTHER FRIGIDA-LIKE PROTEIN 3 545 - -
Amo02g0415 545 Coils Coil 51 71 - -
Amo02g0415 545 MobiDBLite consensus disorder prediction 450 475 - -
Amo02g0415 545 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0415 Amo-Chr2 5157098 5162151 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0415 - - adu:107472711 974.926