Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0325 ATGAAGAAGTTGGTCCTCAAATTAGACTTGCATGATGACAAGGACAAACAAAAAGCTTTGAAAACAGTGTCAACACTTTCAGGTATTGATGCAATCTCAATGGACATGAAAGAGAAGAAATTAACAGTTATAGGGACAGTGGATCCAATAACTGTTGTAAGCAAATTGAGGAAGCATTGGCAAACAGATCTTGTGGTGGTTGGACCAGCCAAGGAGCCAGAGAAGAAAGATGATGGAAAGAAAGATGAAGGAAAAAAAGATGGAGAAAAAAAAGAAGAGGGAAAGAAAGATGGAGAAAAGAAAGAAGAAGAAAAGAAGATGATAAGAAGAAAGATCAAGCACCACTTGACCCTGCTGCTGTTATGGAGATGGTTAAGGCTCAACAAAGGGCTTATTATTATTATAATAATCCCTACATGA 420 0.3738 MKKLVLKLDLHDDKDKQKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPITVVSKLRKHWQTDLVVVGPAKEPEKKDDGKKDEGKKDGEKKEEGKKDGEKKEEEKKMIRRKIKHHLTLLLLWRWLRLNKGLIIIIIIPT* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0325 139 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Amo02g0325 139 MobiDBLite consensus disorder prediction 67 106 - -
Amo02g0325 139 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 107 - -
Amo02g0325 139 Gene3D - 1 72 - -
Amo02g0325 139 MobiDBLite consensus disorder prediction 69 106 - -
Amo02g0325 139 SUPERFAMILY HMA, heavy metal-associated domain 2 58 IPR036163 GO:0046872
Amo02g0325 139 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0325 Amo-Chr2 4001787 4004157 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0325 - - gmx:100499838 109.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3508 14 138590438 138593727 Amo02g0325 02 4001787 4004157 PCT
Amo04g2349 04 95639622 95642856 Amo02g0325 02 4001787 4004157 PCT
Amo02g0325 02 4001787 4004157 Amo14g3508 14 138590438 138593727 PCT
Amo02g0325 02 4001787 4004157 Amo04g2349 04 95639622 95642856 PCT