Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0313 ATGGCAGAAATTGATCAAGTTAGACCCTTAGCCCCATCAAGAGACCAACAAAGTAGTAGTGATGATGAAGAAGCTCTCATCAAAAGCAAACATCTTAGGAGAATCAAATTATGTGGATGTGCCAAAGATCCCATAGTTACAACTAATAATATCACACTCACAAACCTAGACTTTAGTGTAAATTTAAATCCTATGACTCCTAACATGTCTATTAAAAATCCTAATTCTGCATCCTTCAAATTTCGTAATGCAACCACGGCCATAAACTACCGTGGGGTAGCCGTGGCCGAGGTGAAGAATCCGCCGGGGATTGCCAAGGCTAGGCGAACATTTAGGATGAATGTCACGGCGGATGTGTTGGCCGACCGGCTCGCGACTAGACCGGAATTGTTTTCGGATGTTATGTCCGGGCACATTACCTTAAACACCTACACAGAGATTTCAGGACGTGTTAAGATTTTGATAATTAAGAAACATGCTGAGATTAAGATGAATTGCACTGTGAATGTTGATTTTTCAAGTAAGCAAGTTCAGGACATGAATTGCAAACGTAAGGAATGA 561 0.4118 MAEIDQVRPLAPSRDQQSSSDDEEALIKSKHLRRIKLCGCAKDPIVTTNNITLTNLDFSVNLNPMTPNMSIKNPNSASFKFRNATTAINYRGVAVAEVKNPPGIAKARRTFRMNVTADVLADRLATRPELFSDVMSGHITLNTYTEISGRVKILIIKKHAEIKMNCTVNVDFSSKQVQDMNCKRKE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0313 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 42 185 - -
Amo02g0313 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 42 185 - -
Amo02g0313 186 Gene3D - 37 176 - -
Amo02g0313 186 MobiDBLite consensus disorder prediction 1 25 - -
Amo02g0313 186 Pfam Late embryogenesis abundant protein 69 167 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0313 Amo-Chr2 3864473 3865744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0313 - - adu:107472891 319.316