Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0183 ATGGCAGAACAACCAACCAAGGTGGAGACACCTCCTGCTCCGCTGGTAACTGACCCTCCTCTGGCCGAGGCACCGCCGCAGCTCCAAGATGCTGCTGAGAAGAAACCGCTGGCTCCGCCTCCGGCAGCCGCTGCAGAAGGGACCAAGGCTCTAGTTGTTGTTGAGAATGAGAAAGCAGTGGAGCCAATTAAAAAGAAAACATCCCTTGATAGAGATATTGCTCTTGCAGAAGTGGAAAAGGAGAAAAAGTTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAATCTAAAGCAGAGAATAAAGCTCAGAAGCAGTTATCTGCTGTTGGTGCTTGGGAAAATAGCAAGAAAGCAGCTCTTGAAGCTAAGCTGAGAAAAATTGAGGAACAGTTGGAGAAAAAGAAAGCAGAATATGGCGAACAAATGAAGAACAAGATAGCATTGATTCACAAGCAAGCTGAGGAGAAGAGAGCAATGGTTGAAGCAAAGCGTGGTGAGGAATTTCTCAAGGCTGAGGAAACCGCCGCTAAATATCGTGCAACTGGGACCACTCCAAAGAAGGTCCTCGGATGCTTTTGA 579 0.4715 MAEQPTKVETPPAPLVTDPPLAEAPPQLQDAAEKKPLAPPPAAAAEGTKALVVVENEKAVEPIKKKTSLDRDIALAEVEKEKKLSYVKAWEESEKSKAENKAQKQLSAVGAWENSKKAALEAKLRKIEEQLEKKKAEYGEQMKNKIALIHKQAEEKRAMVEAKRGEEFLKAEETAAKYRATGTTPKKVLGCF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0183 192 Coils Coil 117 144 - -
Amo02g0183 192 PANTHER CARBOXY-TERMINAL REGION REMORIN 14 192 - -
Amo02g0183 192 PANTHER OS02G0117200 PROTEIN 14 192 - -
Amo02g0183 192 Pfam Remorin, C-terminal region 82 187 IPR005516 -
Amo02g0183 192 Pfam Remorin, N-terminal region 29 78 IPR005518 -
Amo02g0183 192 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0183 Amo-Chr2 2075931 2079551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0183 - - gmx:100802984 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2905 04 104259985 104262196 Amo02g0183 02 2075931 2079551 PCT
Amo02g0183 02 2075931 2079551 Amo04g2905 04 104259985 104262196 PCT