Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0159 ATGTCATTTATCTGTGGCCTTCCTATACTTGAGTGTGTGTATTGTCTTGGGTGTGCTCGTTGGGTTTGGAAGAAATGTCTGTACACTGCAGGCTATGAGAGTGAAAACTGGGGCCTAGCTACTGCTGAAGAATTCGAGCCTGTACCTCGAATCTGCCGGATAATCTTATCGGTTTATGAGGAAGATCTTCGTAACCCCCAATGGGCTCCGCCAGGGGGTTATGGCATGAACCCTGACTGGGTTGTCTTGCGTAAGGATTATGAGGATAATCAAGGTTGTGTTACTCCATACATGATATATCTTGACCATGATCATGCTGAAATTATACTGGCTGTTAGGGGCCTTAATTTAGCAAAGGAAAGTGATTATGCAGTTTTACTTGATAACAAACTGGGGCAGGCTGAGTTTCATGGTGGTTATGTTCATAATGGGTTACTTAAGGCTGCAGGCTGGGTTTTCGATGCGGAGTATGAGGTTCTTCGGGATTTGATAGCGAAGAATCCGACATATATGCTCATATTTGGTGGACACTCCCTAGGGGCAGGGGTGGTAGCATTATTGACATTGCTAGCACTTGATAACCGAGACAAATTGGGGATACAGAGAAACAAGATAAGATGCTTCGCCTTAGCTCCTACTCGGTGCATGTCTCTCAATTTGGCTGTAAGATATGCGGATGTTATCAATTCCGTTGTACTCCAGGATGATTTTTTGCCTCGGACAACTACTGCTCTAGAAGTTCTCTTCAAGTTGCTTTTATGTTTACCTTGTTTACTGTGTATAATGTGCCTAAAGGATACTTGCACACTGGAGGAGAAGATGCTTAAAGATCCAAGGCGTCTATACGCACCTGGTCGTCTCTATCACATTGTGGAGCGGAAGCCCTTGAGGATAGGAAGATTTCCACCTGTCGTTAGGACAGCAGTACCCGTTGATGGGAGGTTCGATCATATTGTTCTTTCTTGCAATGCGACTTCCGACCATGCCATCATTTGGATTGAGAGAGAAGCCCAATGGGCTCTTAATTTAATGCTAGAGAAAGATCAGCAGATGGAAATTCCAGCAGAACAAAAGATGGTCCGGCAAGAATCACTGGCCCGGGAGCACAGCCAAGAGTACCACGCGGCCCTTCAAAGGGCGGTCGCTTTGGATATTCCGCAAGCTTATTCGCCATCCTCATACGGAACCTTTCAGGAAATACATGACGGGGAAGATTCGGGCGGTTTGAGAAGGTCCAAAGGGTCTTTCTTGTCCAGCAAGAAAAGAACAGAAAGTTGGAATGAGTTTGTTGGGCGCCTTTTTGATGTAGATGACTCAGGTCATATGGTTTTCAAGAAGACAAATGTGTAA 1350 0.4526 MSFICGLPILECVYCLGCARWVWKKCLYTAGYESENWGLATAEEFEPVPRICRIILSVYEEDLRNPQWAPPGGYGMNPDWVVLRKDYEDNQGCVTPYMIYLDHDHAEIILAVRGLNLAKESDYAVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRDLIAKNPTYMLIFGGHSLGAGVVALLTLLALDNRDKLGIQRNKIRCFALAPTRCMSLNLAVRYADVINSVVLQDDFLPRTTTALEVLFKLLLCLPCLLCIMCLKDTCTLEEKMLKDPRRLYAPGRLYHIVERKPLRIGRFPPVVRTAVPVDGRFDHIVLSCNATSDHAIIWIEREAQWALNLMLEKDQQMEIPAEQKMVRQESLAREHSQEYHAALQRAVALDIPQAYSPSSYGTFQEIHDGEDSGGLRRSKGSFLSSKKRTESWNEFVGRLFDVDDSGHMVFKKTNV* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0159 449 CDD Lipase_3 44 240 - -
Amo02g0159 449 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Amo02g0159 449 Pfam Lipase (class 3) 110 243 IPR002921 GO:0006629
Amo02g0159 449 Gene3D alpha/beta hydrolase 39 250 IPR029058 -
Amo02g0159 449 SUPERFAMILY alpha/beta-Hydrolases 43 243 IPR029058 -
Amo02g0159 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Amo02g0159 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0159 Amo-Chr2 1914948 1918652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0159 1 449 Miscellaneous Gene Families AT3G49050 61.895 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0159 - - gmx:100800227 758.059