Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo02g0154 | ATGAATACAGGAATTCTTGAAGTGCTTCTTGTTAATGCTAAAGGAATTAAGCACACAAACCTTGTTGGAATACCTTCCTACTATGTTATTATTGAGTGTGGGTGTCAATGTCAAAGAAGCAAAGTTTCAAAAGGGAAACATAAGAAACCTTGGTGGAACGAGAAATTCATATTTGATTTCTCATCTTTGGATTATAAAAATTCAACCTATCTTAACTGCACAATCATGGACACAAAACCCTATAGACATGGTGGATTTGTGGGTGAAGCCAAGGTTTACATAGGTGGATTAATCACGGAAGGAATTAAAGAAGGACATATAGAAATAAAACCAGCTCCATATAATGTGGTCCTTGAAGATCACACGTACCAAGGACAGATAAAGATTGGATTAAAATTCTTTGCAAATAAAGAAAATTATGAGTATGTGAATGTGATGGGGAAAGAATTCATTGCTCCGAAGAAAGAAACAAATTCAATTTTTGGATCTTTTATGAAGCTATGGAGGACAATATCATGGTGGAAAGTATTGCTTTTCTGTAATAAAAAGAGTTATAATTAA | 561 | 0.3351 | MNTGILEVLLVNAKGIKHTNLVGIPSYYVIIECGCQCQRSKVSKGKHKKPWWNEKFIFDFSSLDYKNSTYLNCTIMDTKPYRHGGFVGEAKVYIGGLITEGIKEGHIEIKPAPYNVVLEDHTYQGQIKIGLKFFANKENYEYVNVMGKEFIAPKKETNSIFGSFMKLWRTISWWKVLLFCNKKSYN* | 187 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo02g0154 | 186 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Amo02g0154 | 186 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 134 | IPR035892 | - | |
| Amo02g0154 | 186 | Pfam | C2 domain | 4 | 103 | IPR000008 | - | |
| Amo02g0154 | 186 | PANTHER | C2 DOMAIN-CONTAINING | 1 | 183 | - | - | |
| Amo02g0154 | 186 | Gene3D | C2 domain | 2 | 135 | IPR035892 | - | |
| Amo02g0154 | 186 | PANTHER | CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN | 1 | 183 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo02g0154 | Amo-Chr2 | 1873639 | 1875444 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo02g0154 | - | - | gmx:100782233 | 236.113 |