LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo02g0153	ATGGAAAATTCATCAAATTTTGATGAAAGTTCTGATTTGGGGTATCAGCAATCAACTTCTTCTATGGATCAAAATGATCAAAGTACTGAATACTCTCCATTCAGTGGTGATTCATTTGCATATTGTAGGAGTAACTCAGAGGCCTCAAACTTGTCATCATTAGAGCCTGTTGATGACAATCATAGTTTTGCTAGTAGTGATCTTCAACCTTCGCCGCCTTCTCGGTGGATTGCCGCCGCCACCATGAGAACCGAGTCTAGTCATCATCATGGAGCTGCTCTTTCAAGTCTTGGAGGAATGAAGAAGAGGATGCATTCACTAGATAGTAAATCTGATGATCTTGATCTGCTGGAGTCAGAGCTTGAAATGATGAAGGAAAGATTTGCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGAAAAGGTGTATGCACTGCAGTTACAATCTCAAACTCCATTACTAACCTTTATGCAACTGTTTTTGGACAAAACCTGAAGTTGGAGCCTCTGAAGGCTGAGAAGAAAGCCATGTGGAGAAGAGAAATGAATTGTCTTCTATCTCTCTGTGATTACATTGTTGAATTTGCTCCAACTGCACAATGCTTAGATGATGGCACAATTGTAGAGATGATGACAAGCAGACCAAGATCAGATATTTATATCAACCTTCCAGCTTTACAGAAACTTGACACATTGCTTATGGAAATATTGGATAGTTTCAAGGATACTGAATTTTGGTATGCGGAACAAGGGAGTATGTCGGGGAATTCGTCTCGGTCACGTGCCGGATCGTTTCGAAGGGTGGTTGTTCAAAGGAAAGACGAGAAATGGTGGTTGCCAGTTCCCTGTGTTCACCCTGGTGGCCTCTCTGATAAGTCAAGGAAGCACTTGATTGAGAAAAGAGATTGTGCAAATCAAATTCATAAAGCAGCCATGGCAATAAATAGCAGTGTTCTAGCAGAGATGGTTATCCCTGAGACATACATGGCAAATCTTCCCAAGAGTGGAAGAGCATGCCTAGGGGACACAGTTTACCGCTATATGTCTTCTGCAGACAAATTCTCACCTGATCACCTTCTTGATTGCCTTAAAATAAGCTCTGAACATGAAGCACTTGAGCTGGCAGACAGGGTTGAATCTTCGATGTACACATGGCGGCGAAAGGCTTGTTTAAGCAACTCAAAATCATCATGGAACAAAGTGAAGGATCTCATGGCCGAAACCGACCGCAAAGACAAGAACTTTTTGTTAGCTGAGAAAGCTGAGACTTTGTTGTTCTGCTTGAAGCAAAGATATCCTGAACTTTCACAGACTTCCTTGGACACATGCAAAATTCAATACAATCAGGATGTAGGAAAAGCAATACTAGAAAGCTACTCAAGAGTTTTAGAAGGCTTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCATTGTGCAGATAAGTCAATGAGAAACCAACATGTATAG	1473	0.4148	MENSSNFDESSDLGYQQSTSSMDQNDQSTEYSPFSGDSFAYCRSNSEASNLSSLEPVDDNHSFASSDLQPSPPSRWIAAATMRTESSHHHGAALSSLGGMKKRMHSLDSKSDDLDLLESELEMMKERFAKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKAEKKAMWRREMNCLLSLCDYIVEFAPTAQCLDDGTIVEMMTSRPRSDIYINLPALQKLDTLLMEILDSFKDTEFWYAEQGSMSGNSSRSRAGSFRRVVVQRKDEKWWLPVPCVHPGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMVIPETYMANLPKSGRACLGDTVYRYMSSADKFSPDHLLDCLKISSEHEALELADRVESSMYTWRRKACLSNSKSSWNKVKDLMAETDRKDKNFLLAEKAETLLFCLKQRYPELSQTSLDTCKIQYNQDVGKAILESYSRVLEGLAFNIVAWIEDVHCADKSMRNQHV*	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo02g0153	490	MobiDBLite	consensus disorder prediction	50	72	-	-
	Amo02g0153	490	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	119	486	IPR005512	GO:0005085
	Amo02g0153	490	Gene3D	PRONE domain, subdomain 1	356	490	-	-
	Amo02g0153	490	Gene3D	PRONE domain, subdomain 1	114	355	-	-
	Amo02g0153	490	ProSiteProfiles	PRONE domain profile.	111	490	IPR005512	GO:0005085
	Amo02g0153	490	MobiDBLite	consensus disorder prediction	50	74	-	-
	Amo02g0153	490	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	1	334	IPR038937	GO:0005085
	Amo02g0153	490	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	334	490	IPR038937	GO:0005085
	Amo02g0153	490	Coils	Coil	107	127	-	-
	Amo02g0153	490	MobiDBLite	consensus disorder prediction	1	34	-	-
	Amo02g0153	490	PANTHER	PRONE DOMAIN-CONTAINING PROTEIN-RELATED	1	334	-	-
	Amo02g0153	490	PANTHER	PRONE DOMAIN-CONTAINING PROTEIN-RELATED	334	490	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo02g0153	Amo-Chr2	1863808	1867507	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo02g0153	-		-	gmx:100785956	746.117