Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0144 ATGGTTCTTCCACATGGTGTGTTCCTTCTCTTCATGCTCTCTTCTGCAACTTTGGCTTTGGCTGGAGACATAGTTCACCATGATGATGTTGCTCCAAGAAGACCTGGCTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTGGATTGATGGTGTTGAAAACAGTGAGTATGTAGGTGTTGGTGCAAGATTCGGCCCTACTTTGGAGTCAAAAGAGAAACGTGCCAACCACACTAGAGTTGTCATGGCTGACCCTCCTGATTGTTGTTCCAAGCCTAAGAATAAGCTCACTAGCGAGATCATTGTGGTGCAACGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGAGGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATAGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACCGATGTTGATATTGGTATACCCGCTGTCATGCTTCCACAATATGCTGGATTAAACATAGAAAAACATATAAAAAACAACTCCACAGTGTCCGTGCAGTTATACTCTCCGCTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTCTATGGCTTATGGCCGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCGGATGAATACCTTAGCACACAGAATGTTGGTTCAAGTGGTTATGTGGAAATCAGTACCGTGGCTGCAATTTTATTTGTTGTGATCGCTTCTTGTTTCCTGGTTATGCTTTACAAGTTAATGTCCTTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGGGGAGTAGAGGGACTGCAAACTTGTTTGGTGGCTCTTTTATCATGTTTCAGATGGTTTCAACATGCTGCACAAACATTTGTGAAAATTCCCTTCTTTGGAGCCGTCTCATATCTGACATTTGCCGTTACCCCCTTTTGCATAGTGTTCGCTGTGATATGGGCAGTTTATCGTCGTGCTTCGTTTGCTTGGATCGGTCAAGACATCCTTGGTATCACACTGATAATTACAGTTCTTCAGATTGTACGGATACCGAATCTCAAGGTTGGAACTGTTCTTCTCAGCTGCGCCTTCCTATACGACATCTTTTGGGTGTTCGTTTCTAAACGGTGGTTCCATGAGAGCGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCAATGCTACTAAAGATACCACGTTTGTTCGATCCTTGGGGTGGTTACAGCATCATCGGTTTTGGGGACATTATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAGCCTTCGCGCTGGGTACTTCTTGTGGGCAATGACTGCCTATGGCTTAGGTCTCCTCATCACATACGTGGCTTTGAACTTGATGGATGGACATGGCCAACCAGCTTTGCTTTATATAGTCCCCTTCACACTTGGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGGGGGGAACCAGAGAGACCTTGCCCTCACATGCAAGAAGAGGATCAACAATCACTTAACCAGCATTGA 1620 0.4401 MVLPHGVFLLFMLSSATLALAGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTSEIIVVQRGKCSFTTKANIAEEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQYAGLNIEKHIKNNSTVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYLSTQNVGSSGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKIPFFGAVSYLTFAVTPFCIVFAVIWAVYRRASFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHMQEEDQQSLNQH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0144 539 Gene3D - 37 181 - -
Amo02g0144 539 Pfam PA domain 87 163 IPR003137 -
Amo02g0144 539 SUPERFAMILY PA domain 97 135 IPR046450 -
Amo02g0144 539 SMART psh_8 240 509 IPR006639 GO:0004190|GO:0016021
Amo02g0144 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 5 538 IPR007369 GO:0004190|GO:0016021
Amo02g0144 539 Pfam Signal peptide peptidase 241 520 IPR007369 GO:0004190|GO:0016021
Amo02g0144 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 5 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0144 Amo-Chr2 1769500 1776577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0144 K09597 - gmx:100795197 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3364 14 136053243 136053572 Amo02g0144 02 1769500 1776577 PCT
Amo02g0144 02 1769500 1776577 Amo14g3364 14 136053243 136053572 PCT