Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0075 AAGATCGTAAGCAATGACGCAAACCTTGCAAGTTATAAATATAATTGGAAGAGTGAAACAGTGAGAGAGAAGACACCATCAATGGCGGAAGTGAAGAACAAGCAAGTGGTTTTGAAGGATTATGTCACCGGTTTCCTTAAGGAATCAGACTTGGACTTAGTTGAAAACACCATCACTCTCAAGCTTCCAGAAGGTTCCAATGAGATCCTTCTCAAGAATCTCTATTTGTCTTGTGATCCTTTCATGCGAAACCTTATGAGCGACATAGGAATCCTTGAGAAGTTCCTTCCATATGCTCCTGGCTCTCCATTATTTGGATATGGGGTGGCTAAAGTCCTGGAATCCGGACACCCTGATTACAAGAAGGGTGATTTGGTGTGGGGGTTTACTAAATGGGAAGAGTACAGCTTGGTTCCCTCATCTCGAATTCTTTTCAAAATCGAGCACACCGATGTTCCACTTTCATACTATACTGGAATTCTTGGTATGCCAGGAATGACTGCTTATGCCGGTTTCTTTGAAGTTGGGCTTCCTAAAAAAGGAGAGAAAGTTTTTGTTTCTGCTGCCTCTGGTGCAGTTGGTCAACTTGTTGGCCAGTTTGCGAAATTGACCGGTTGCTATGTCGTTGGAAGTGCTGGAAGTAAAGACAAGGTGGATTTGTTGAAGAATAAATTCGGATTCGATGATGCTTTTAACTACAAGGAAGAGCCTGACCTCGATGCTGCATTGAAAAGATACTTCCCTGAAGGCATTGACATTTACTTTGAGAATGTTGGAGGGAAGACACTTGATGCTGTGCTGCTAAATATGAGAGTCCATGGCCGAATAGTAGTATGTGGAATGATCTCGCAGTACAATCGTGCTCAACCTGAAGGGGTAACAAATCTGGGAAATCTCATAATGAAGCGGATTCGTATGCAAGGTCTTGCTGTCACCGATTACTATCCGATGTATCACAAGTTGGTGGAGTATGTGGTGCCGAAAATCAAAGAAGAGAAGATTGTATATGTGGAAGACATAGCTGAGGGACTTGAAAACGGCCCTGCTGCTTTGGTTGGCCTCTTTAATGGTCGCAATGTTGGCAAACAAGTTCTTGTTCTTGCCCGTGAATGA 1113 0.4313 KIVSNDANLASYKYNWKSETVREKTPSMAEVKNKQVVLKDYVTGFLKESDLDLVENTITLKLPEGSNEILLKNLYLSCDPFMRNLMSDIGILEKFLPYAPGSPLFGYGVAKVLESGHPDYKKGDLVWGFTKWEEYSLVPSSRILFKIEHTDVPLSYYTGILGMPGMTAYAGFFEVGLPKKGEKVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKDKVDLLKNKFGFDDAFNYKEEPDLDAALKRYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIVVCGMISQYNRAQPEGVTNLGNLIMKRIRMQGLAVTDYYPMYHKLVEYVVPKIKEEKIVYVEDIAEGLENGPAALVGLFNGRNVGKQVLVLARE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0075 370 Pfam Zinc-binding dehydrogenase 192 323 IPR013149 -
Amo02g0075 370 Pfam N-terminal domain of oxidoreductase 34 141 IPR041694 -
Amo02g0075 370 PANTHER PROSTAGLANDIN REDUCTASE 28 370 IPR045010 GO:0016628
Amo02g0075 370 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 28 370 - -
Amo02g0075 370 Gene3D - 160 336 - -
Amo02g0075 370 Gene3D - 35 365 - -
Amo02g0075 370 SMART PKS_ER_names_mod 49 365 IPR020843 GO:0016491
Amo02g0075 370 SUPERFAMILY GroES-like 31 197 IPR011032 -
Amo02g0075 370 CDD double_bond_reductase_like 31 367 - -
Amo02g0075 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 330 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0075 Amo-Chr2 891174 893865 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0075 K19825 - ahf:112775483 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0763 19 12028930 12032904 Amo02g0075 02 891174 893865 hybridization